|   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | |
. | . | . | . | 80 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
| . |
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
Query Sequence |   |
Q | V | K | I | Y | H | N | P | R | C | S | K | S | R | E | T | L | N | L | L | K | E | N | G | V | E | P | E | V | V | L | Y | L | E | T | P | A | D | A | A | T | L | R | D | L | L | K | I | L | G | M | N | S | A | R | E | L | M | R | Q | K | E | D | L | Y | K | E | L | N | L | A | D | . |
S | S | L | S | E | E | A |
Query Conservation |   |
  |
|   |
|
|   |   |   |   |
|
|
|
|
|
|
|   |   |   |
|   |   |   |   |
|   |   |   |   |
|
|   |   |   |   |
|   |
|   |   |
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |
|
|
|   |   |   |   |   |   |   |   |
|   |
|   |   | . |   |   |
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|   |   |   |   |
|   |
|   |
|
|
|   |   |   |
|   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |
|
|   |   |   |
|   |   |   | . | . | . |
|   |   |   |
|
|
|   |   |
|   |   |   |
|   |
|   |   |   |   |   |   |   |
|
|   |   |
|
Template Sequence |   |
T | Y | V | L | Y | G | I | K | A | C | D | T | X | K | K | A | R | T | W | L | D | E | H | K | V | A | Y | D | F | H | D | Y | K | A | V | G | I | D | R | E | H | L | R | R | W | C | A | E | H | . |
. |
. |
G | W | Q | T | V | L | N | R | A | G | T | T | F | R | K | L | D | E | A | Q | K | A | D | L | D | E | A | K |
Template Known Secondary structure |   |
|  |  |  |  |  |
| S | S |
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  | . | . | . |
|  |  |  |  | B |
| T | T | S |  |  |  |  | T | S |
|  |  |  |  | T | T |
|
|  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
| . | . | . |
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | |
|
|
. | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . |
  |
  |   |
83 | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|  |  |  |
|
|  |  |  |  |
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | I | Q | A | M | V | D | N | P | K | L | M | E | R | P | I | V | V | A | N | G | K | A | R | I | G | R | P | P | E | Q | V | L | E | I | V |
Query Conservation |   |
  |   |   |   |
|   |   |   |
|   |
|
|
|
|
|
|
|   |   |   |   |   |   |   |
|
|   |   |   |
|   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|
|   |   |   |
|   |
|
|
|
|
|
|
|   |   |   |   |   |   |   |
|
|
|   |   |   |   |   |   |   |   |
|
Template Sequence |   |
A | I | E | L | X | L | A | Q | P | S | X | I | K | R | P | V | L | E | L | G | G | R | T | L | V | G | F | K | P | D | A | Y | A | A | A | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |
| G | G | G | B |
| S |
|  |  |  |
| S | S |
|  |  |  | S |
|
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|  |  |
|
|
|  |  |  |  |
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
79 | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . |
  |