Job Description P76569 Confidence 100.00% Date Thu Jan 5 12:24:41 GMT 2012 Rank 6 Aligned Residues 113 % Identity 21% Template c3l78A_ PDB info PDB header:transcription Chain: A: PDB Molecule:regulatory protein spx; PDBTitle: the crystal structure of smu.1142c from streptococcus mutans ua159 Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	I	Y	H	N	P	R	C	S	K	S	R	E	T	L	N	L	L	K	E	N	G	V	E	P	E	V	V	L	Y	L	E	T	P	A	D	A	A	T	L	R	D	L	L	K	I	L	G	M	N	S	A	R	E	L	M	R	Q	K	E	D	L	Y	K	E	L	N	L	A	D	S	S	L	S	E	E	A	L	I
Query Conservation
Alig confidence																																																				.
Template Conservation																																																				.
Template Sequence		V	T	L	F	L	S	P	S	C	T	S	C	R	K	A	R	A	W	L	N	R	H	D	V	V	F	Q	E	H	N	I	M	T	S	P	L	S	R	D	E	L	L	K	I	L	S	Y	T	E	N	.	G	T	E	D	I	I	S	T	R	S	K	V	F	Q	K	L	D	I	D	V	D	E	L	S	V	S	E	L	I
Template Known Secondary structure								S	S														T	T								T	T	T	S															S	S	.	T					B		T	T							T	T			G	G	G
Template Predicted Secondary structure																																																				.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	M	V	D	N	P	K	L	M	E	R	P	I	V	V	A	N	G	K	A	R	I	G	R	P	P	E	Q	V	L	E	I	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	L	I	S	K	N	P	S	L	L	R	R	P	I	I	M	D	N	K	R	M	Q	I	G	F	N	E	D	E	I	R	A	F	L
Template Known Secondary structure								G	G	G	B		S						S	S					S			T	T	G	G	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions