Return to main results Retrieve Phyre Job Id

Job DescriptionP76569
Confidence25.17%DateThu Jan 5 12:24:41 GMT 2012
Rank246Aligned Residues45
% Identity22%Templatec2vfjA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:tumor necrosis factor; PDBTitle: structure of the a20 ovarian tumour (otu) domain
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   57..60.........70.........80.........90.........100.....
Predicted Secondary structure 



















Query SS confidence 
















































Query Sequence  ARELMRQKEDLYKELNLADSSLSEEALIQAMVDNPKLMERPIVVANGKA
Query Conservation     


        
 
    

  
    
   
 






      
Alig confidence 






























....













Template Conservation 
  

 


         
 



 


 

....








 

  
Template Sequence  WDNLIKMASTDTPMAGLQYNSLEEIHIFVLC. . . . NILRRPIIVISDKV
Template Known Secondary structure  TSSS





SS



....TS




Template Predicted Secondary structure 











....




Template SS confidence 
















































   168.170.........180.........190........ .200.........210..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions