Job Description P0AFK2 Confidence 5.79% Date Thu Jan 5 11:26:34 GMT 2012 Rank 3 Aligned Residues 93 % Identity 15% Template c3chxG_ PDB info PDB header:membrane protein Chain: G: PDB Molecule:pmoc; PDBTitle: crystal structure of methylosinus trichosporium ob3b2 particulate methane monooxygenase (pmmo) Resolution 3.90 Å

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		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.		.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		Y	A	S	L	L	L	Q	V	F	F	F	A	A	N	I	Y	.	G	W	Y	A	W	S	R	Q	T	S	Q	N	E	A	E	L	K	I	R	W	L	P	L	P	K	A	L	S	W	L	A	V	C	V	V	S	I	G	L	M	T	V	F	I	N	P	V	F	A	F	L	T	R	V	A	V	M	I	M	Q	A	L	G
Query Conservation																		.
Alig confidence																		.																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	G	V	A	G	L	N	I	F	Y	L	I	V	R	I	Y	E	Q	I	Y	G	W	R	A	G	L	D	S	F	A	P	E	F	Q	T	Y	W	L	S	I	L	W	T	E	I	P	L	E	L	V	S	G	L	A	L	A	G	W	L	W	K	T	R	D	R	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																		T	T	T	G	G	G	T	T	T	T		T	T	S	T	T	S	T	T	T	T	T	T	T	T	T	T																			T	S		S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	V	V	M	P	E	L	Q	P	D	A	F	P	F	W	D	S	C	M	M	V	L	S	I	V	A	M	I	L	M	T	R	K	Y	V	E	N	W	L	L	W	V	I	I	N	V	I	S	V	V
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Template Conservation		.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Template Sequence		.	.	.	.	.	.	.	.	V	D	A	V	A	P	R	E	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	R	R	H	V	.	V	L	V	E	W	L	V	V	Y	A	V	A	I	Y
Template Known Secondary structure		.	.	.	.	.	.	.	.		S	S							.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Template SS confidence
										92	.	.	.	.	.	.	.	100															.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions