Job Description P0A6L2 Confidence 96.92% Date Thu Jan 5 11:03:25 GMT 2012 Rank 74 Aligned Residues 225 % Identity 12% Template d1ej7l1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 2.45

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.					.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																																												.	.	.	.
Query SS confidence																																																												.	.	.	.
Query Sequence		V	A	I	V	T	P	M	D	E	K	G	N	V	C	R	A	S	L	K	K	L	I	D	Y	H	V	A	S	G	T	S	A	I	V	S	V	G	T	T	G	E	S	A	T	L	N	H	D	E	H	A	D	V	V	M	M	T	L	.	.	.	.	D	L	A	D	G	R	I	P	V	I	A	G	T	G	A	N	A	T
Query Conservation																																																												.	.	.	.
Alig confidence																																																												.	.	.	.
Template Conservation
Template Sequence		P	L	L	G	C	T	I	K	P	K	L	G	L	S	A	K	N	Y	G	R	A	V	Y	E	C	L	R	G	G	L	D	F	T	K	D	D	E	N	V	N	S	Q	P	F	M	R	W	R	D	R	F	L	F	C	A	E	A	L	Y	K	A	Q	A	E	T	G	E	I	K	G	H	Y	L	N	A	T	A	G	T	C
Template Known Secondary structure									S	S	S	S																	T	T		S						T	T		S	S	B	T	T	B																					S	S											S	S
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.																					.	.	.	.	.	110	.	.	.	.	.	.	.											.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.
Query Sequence		A	E	A	I	S	L	T	Q	R	F	N	D	S	G	I	V	G	C	L	T	V	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	Y	Y	N	R	P	S	Q	E	G	L	Y	Q	.	.	.	.	.	.	.	.	.	.	H	F	K	A	I	A	E	H	T	D	L	P	Q	I	L
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	E	M	I	K	R	A	V	F	A	R	E	L	G	V	P	I	V	M	H	D	Y	L	T	G	G	F	T	A	N	T	S	L	A	H	Y	C	R	D	N	G	L	L	L	H	I	H	R	A	M	H	A	V	I	D	R	Q	K	N	H	G	I	H	F	R	V	L	A	K	A	L	R	M	S	G	G	D	H	I	H
Template Known Secondary structure															T		S																									T								T	T						S		S	S	S	S																S
Template Predicted Secondary structure
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.																								.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	N	V	P	S	R	T	G	C	D	L	L	P	E	T	V	G	R	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	V	K	N	I	I	G	I	K	E	A	T	G	N	L	T	R	V	N	Q	I	K	E	L	V	S	D	D	F	V	L	L	S	G	D	D	A
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.
Template Sequence		S	G	T	V	.	V	G	K	L	E	G	E	R	D	I	T	L	G	F	V	D	L	L	R	D	D	F	V	E	Q	D	R	S	R	G	I	Y	F	T	Q	D	W	V	S	L	P	G	V	L	P	V	A	S	G	G	I	H	V	W	H	M	P	A	L	T	E	I	F	G	D	D	S	V	L	Q	F	G	G	G	T
Template Known Secondary structure						.	T	T			T	T															S					B	G	G	G	T	B		S					T	T										S	S			G	G	G										S	S						S	T	T	T
Template Predicted Secondary structure						.
Template SS confidence
		328	.	330	.		.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.														.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	A	L	D	F	M	Q	L	G	G	H	G	V	I	S	V	T	A	N	V	A	A	R	D	M	A	Q	M	C	K	L	A	A	E	G	H	F	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	A	R	V	I	N	Q	R	L	M	P	L	H	N	K	L
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.											.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.											.	.	.	.
Template Sequence		L	.	.	.	.	.	.	.	G	H	P	W	G	N	A	P	G	A	.	.	.	.	V	A	N	R	V	A	L	E	A	C	V	K	A	R	N	E	G	R	D	L	A	Q	E	G	N	E	I	I	R	E	A	C	K	W	S	P	E	L	A	A	A	C	E	V	W
Template Known Secondary structure		T	.	.	.	.	.	.	.	T	S	T	T							.	.	.	.																T	T																	S								T
Template Predicted Secondary structure			.	.	.	.	.	.	.											.	.	.	.
Template SS confidence
		407								.	.	410	.	.	.	.	.	.	.					.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions