Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6L2
Confidence92.97%DateThu Jan 5 11:03:25 GMT 2012
Rank167Aligned Residues128
% Identity6%Templatec3sqsA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:mandelate racemase/muconate lactonizing protein; PDBTitle: crystal structure of a putative mandelate racemase/muconate2 lactonizing protein from dinoroseobacter shibae dfl 12
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   20.........30.........40. ........50.........60.........70........ .80.........90.......
Predicted Secondary structure 




.














.





Query SS confidence 





















.




































.


















Query Sequence  CRASLKKLIDYHVASGTSAIVS. VGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTG. ANATAEAISLTQRFNDSGI
Query Conservation 
       
  
   

 

  . 




   

 


  
             

 

 .  
    
  
  
   

Alig confidence 





















.




































.


















Template Conservation    
            

   




            
   
 


   
    
 



       
      
    
Template Sequence  SIPAMQAEAEEAQKHGYQGYKTRFGYGPKDGPAGMRENLKRVEALREVLGYDVDLMLECYMGWNLDYTKRMLPKLERFEP
Template Known Secondary structure 
TTT
S



GGG
SSS
TT
S
GGG

Template Predicted Secondary structure 





























Template SS confidence 















































































   180.........190.........200.........210.........220.........230.........240.........250.........
 
   98.100.........110.........120.........130.........140.........150.........160
Predicted Secondary structure 



























Query SS confidence 






























































Query Sequence  VGCLTVTPYYNRPSQEGLYQHFKAIAEHTDLPQILYNVPSRTGCDLLPETVGRLAKVKNIIGI
Query Conservation 
 
 
  
     
   
      

     





 
  

   
   
  
   
 
 

Alig confidence 
.......


























......





















Template Conservation   ....... 



    
      
     



 ......


          
     
 
Template Sequence  R. . . . . . . WLEEPVIADDVAGYAELNAMGIVPISG. . . . . . GEHEFSVMGCAELINRKAVSVL
Template Known Secondary structure  S.......

S
TT
T
SS
......
TT

STT

S
Template Predicted Secondary structure  .......









......










Template SS confidence 






























































   260 .........270.........280....... ..290.........300.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions