Job Description P0A6L2 Confidence 91.74% Date Thu Jan 5 11:03:25 GMT 2012 Rank 187 Aligned Residues 212 % Identity 10% Template c3o1hB_ PDB info PDB header:signaling protein Chain: B: PDB Molecule:periplasmic protein tort; PDBTitle: crystal structure of the tors sensor domain - tort complex in the2 presence of tmao Resolution 3.10 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.							.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.
Query Sequence		M	D	E	K	G	N	V	C	R	A	S	L	K	K	L	I	D	Y	H	V	A	S	G	T	S	A	I	V	S	V	G	T	T	G	E	S	A	T	L	N	H	D	E	H	A	D	V	V	M	M	T	L	.	.	.	.	.	.	D	L	A	D	G	R	I	P	V	I	A	G	T	G	A	N	A	T	A	E	A	I
Query Conservation																																																						.	.	.	.	.	.
Alig confidence																																																						.	.	.	.	.	.
Template Conservation
Template Sequence		L	E	A	G	G	Y	P	N	K	S	R	Q	E	Q	Q	L	A	L	C	T	Q	W	G	A	N	A	I	I	L	G	T	V	D	P	H	A	Y	E	H	N	L	K	S	W	V	G	N	T	P	V	F	A	T	V	N	Q	L	D	L	D	E	E	Q	S	T	L	L	K	G	E	V	G	V	D	W	Y	W	M	G	Y
Template Known Secondary structure					S	S	T	T															T	T		S							S	S	T	T	T	T	T	T	T	T					T	T							S	S						T	T	T	T	T	S									T
Template Predicted Secondary structure
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		S	L	T	Q	R	F	N	D	S	G	I	V	.	G	C	L	T	V	T	P	Y	Y	N	R	P	S	Q	E	G	L	Y	Q	H	F	K	A	I	A	E	H	T	D	L	P	Q	I	L	Y	N	V	P	S	R	T	G	C	D	L	L	P	E	T	V	G	R	L	A	K	V	K	N	I	I	G	I	K	E	A	T	G
Query Conservation														.
Alig confidence														.																																								.
Template Conservation																																																						.
Template Sequence		E	A	G	K	Y	L	A	E	R	H	P	K	G	S	G	K	T	N	I	A	L	L	L	G	P	R	T	K	P	V	T	T	G	F	Y	E	A	I	K	N	S	D	I	H	I	V	D	S	F	W	A	D	.	N	D	K	E	L	Q	R	N	L	V	Q	R	V	I	D	M	G	N	I	D	Y	I	V	G	S	A	V
Template Known Secondary structure											S		T	T	S																									S	S	S	S											.	S															T				S
Template Predicted Secondary structure																																																						.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.			.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure															.	.												.											.
Query SS confidence															.	.												.											.
Query Sequence		N	L	T	R	V	N	Q	I	K	E	L	V	S	.	.	D	D	F	V	L	L	S	G	D	D	A	.	S	A	L	D	F	M	Q	L	G	G	.	H	G	V	I	S	V	T	A	N	V	A	A	R	D	M	A	Q	M	C	K	L	A	A	E	G	H
Query Conservation															.	.												.											.
Alig confidence															.	.												.											.
Template Conservation
Template Sequence		A	I	E	A	A	I	S	E	L	R	S	A	D	K	T	H	D	I	G	L	V	S	V	Y	L	S	H	G	V	Y	R	G	L	L	R	N	K	V	L	F	A	P	T	D	K	M	V	Q	Q	G	R	L	S	V	M	Q	A	A	H	Y	L	R	H	Q
Template Known Secondary structure													T	S		T	T	T	S					S	S			T	T							T	T	S			B																						T	T
Template Predicted Secondary structure
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions