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Job DescriptionP0A6L2
Confidence100.00%DateThu Jan 5 11:03:25 GMT 2012
Rank24Aligned Residues291
% Identity28%Templatec3n2xB_
PDB info PDB header:lyaseChain: B: PDB Molecule:uncharacterized protein yage; PDBTitle: crystal structure of yage, a prophage protein belonging to the2 dihydrodipicolinic acid synthase family from e. coli k12 in complex3 with pyruvate
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MFTGSIVAIVTPMDEKGNVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTGAN
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Template Sequence  LFTGIIPPVSTIFTADGQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGGT
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   13......20.........30.........40.........50.........60.........70.........80.........90..
 
   81........90.........100.........110.........120.........130.........140.........150... ......
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Query Sequence  ATAEAISLTQRFNDSGIVGCLTVTPYYNRPSQEGLYQHFKAIAEHTDLPQILYNVPSRTGCDLLPETVGRLAK. VKNIIG
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Template Sequence  NARETIELSQHAQQAGADGIVVINPYYWKVSEANLIRYFEQVADSVTLPVMLYNFPALTGQDLTPALVKTLADSRSNIIG
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   93......100.........110.........120.........130.........140.........150.........160.........170..
 
   160. ........170.........180.........190.........200.........210.........220.........230.......
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Query Sequence  IK. . EATGNLTRVNQIKELVSDDFVLLSGDDASALDFMQLGGHGVISVTANVAARDMAQMCKLAAEGHFAEARVINQRLM
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Template Sequence  IDTIDSVAHLRSMIHTVKGAHPHFTVLCGYDDHLFNTLLLGGDGAISASGNFAPQVSVNLLKAWRDGDVAKAAGYHQTLL
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   173......180.........190.........200.........210.........220.........230.........240.........250..
 
   238.240.... .....250.........260.........270.........280.........290.
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Query Sequence  PLHNKLF. VEPNPIPVKWACKELGLVATDTLRLPMTPITDSGRETVRAALKHAGL
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Template Sequence  QIPQMYQLDTPFVNVIKEAIVLCGRPVSTHVLPPASPLDEPRKAQLKTLLQQLKL
Template Known Secondary structure  GGGGGGGSSS
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   254.....260.........270.........280.........290.........300........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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