Job Description P0A6L2 Confidence 88.26% Date Thu Jan 5 11:03:25 GMT 2012 Rank 243 Aligned Residues 133 % Identity 14% Template c3l5aA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nadh/flavin oxidoreductase/nadh oxidase; PDBTitle: crystal structure of a probable nadh-dependent flavin oxidoreductase2 from staphylococcus aureus Resolution 1.65 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50																	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.									.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.
Query Sequence		A	S	L	K	K	L	I	D	Y	H	V	A	S	G	T	S	A	I	V	S	V	G	T	T	G	E	S	A	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	N	H	D	E	H	A	D	V	V	M	M	T	L	D	L	A	D	G	R	I	P	.	.	.	.	.	.	.	.	V	I	A	G	T
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	Q	Y	R	D	A	T	L	R	A	I	K	A	G	F	D	G	V	E	I	S	I	A	Q	R	L	L	I	Q	T	F	F	S	T	F	S	N	R	R	T	D	H	Y	G	A	D	S	L	K	N	R	A	R	L	C	L	E	V	X	R	A	V	Q	E	V	I	D	K	E	A	P	D	N	F	I	L	G	F	R	A
Template Known Secondary structure														T	T		S								T	T	S								T	T	T					S	T	T	S	T	T																										T	T
Template Predicted Secondary structure
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		78										.	80	.	.	.	.	.	.	.	.	.	90	.	.		.	.	.	.	.	.	.	100	.	.										.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.															.											.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.															.											.	.	.	.	.	.	.	.	.
Query Sequence		G	.	.	.	.	.	.	.	.	.	A	N	A	T	A	E	A	I	S	L	T	Q	R	F	.	N	D	S	G	I	V	G	C	L	T	.	.	.	.	.	.	.	.	.	V	T	P	Y	Y	N	R	P	S	Q	E	G	L	Y	Q	H	F	K	A	I	A	E	H	T	D	L	P	Q	I	L	Y	N	V	P	S	R
Query Conservation			.	.	.	.	.	.	.	.	.															.											.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.															.											.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.	.
Template Sequence		T	P	E	E	T	R	G	S	D	L	G	Y	T	I	D	E	F	N	Q	L	I	D	W	V	X	D	V	S	N	I	Q	Y	L	A	I	A	S	W	G	R	H	I	Y	Q	N	T	S	R	T	P	G	D	H	F	G	R	P	V	N	Q	I	V	Y	E	H	L	A	G	R	I	P	L	I	.	.	.	.	.	.	A
Template Known Secondary structure			S					T	T																				S										T	T			G	G	G		B				S	S	T	T	T	T	S	B										T	T	S	S				.	.	.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.	.	.
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.							.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	C	D	L	L	P	E	T	V	G	R	L	A	K	V	K	N	I	I	G	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	G	G	I	N	S	P	E	S	A	L	D	A	L	Q	H	A	D	X	V	G	X
Template Known Secondary structure			S	S			S								G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions