Job Description P0A6L2 Confidence 70.65% Date Thu Jan 5 11:03:25 GMT 2012 Rank 372 Aligned Residues 206 % Identity 8% Template c3hcwB_ PDB info PDB header:rna binding protein Chain: B: PDB Molecule:maltose operon transcriptional repressor; PDBTitle: crystal structure of probable maltose operon transcriptional repressor2 malr from staphylococcus areus Resolution 2.20 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.
Query SS confidence																																																	.
Query Sequence		C	R	A	S	L	K	K	L	I	D	Y	H	V	A	S	G	T	S	A	I	V	S	V	G	T	T	G	E	S	A	T	L	N	H	D	E	H	A	D	V	V	M	M	T	L	D	L	.	A	D	G	R	I	P	V	I	A	G	T	G	A	N	A	T	A	E	A	I	S	L	T	Q	R	F	N	D	S	G	I	V
Query Conservation																																																	.
Alig confidence																																																	.
Template Conservation
Template Sequence		M	N	D	L	M	D	E	V	Y	K	M	I	K	Q	R	M	V	D	A	F	I	L	L	Y	S	K	E	N	D	P	I	K	Q	M	L	I	D	E	S	M	P	F	I	V	I	G	K	P	T	S	D	I	D	H	Q	F	T	H	I	D	N	D	N	I	L	A	S	E	N	L	T	R	H	V	I	E	Q	G	V	D
Template Known Secondary structure															T	T			S					S				T	T										T	T							S				S	S	G	G	G	S	S																					T			S
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.		.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.						170	.
Predicted Secondary structure																																		.																							.																		.	.	.	.	.
Query SS confidence																																		.																							.																		.	.	.	.	.
Query Sequence		G	C	L	T	V	T	P	Y	Y	N	R	P	S	Q	E	G	L	Y	Q	H	F	K	A	I	A	E	H	T	D	L	P	Q	.	I	L	Y	N	V	P	S	R	T	G	C	D	L	L	P	E	T	V	G	R	L	A	.	K	V	K	N	I	I	G	I	K	E	A	T	G	N	L	T	R	.	.	.	.	.	V	N
Query Conservation																																		.																							.																		.	.	.	.	.
Alig confidence																																		.																							.																		.	.	.	.	.
Template Conservation
Template Sequence		E	L	I	F	I	T	E	K	G	N	F	E	V	S	K	D	R	I	Q	G	F	E	T	V	A	S	Q	F	N	L	D	Y	Q	I	I	E	T	S	N	E	R	E	V	I	L	N	Y	M	Q	N	L	H	T	R	L	K	D	P	N	I	K	Q	A	I	I	S	L	D	A	M	L	H	L	A	I	L	S	V	L	Y
Template Known Secondary structure									S	S																			T	T										S																			S	S	S							S	S
Template Predicted Secondary structure
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	K	E	L	V	S	D	D	F	V	L	L	S	G	D	D	A	S	A	L	D	F	M	Q	L	G	G	H	G	V	I	S	V	T	A	N	V	A	A	R	D	M	A	Q	M	C	K	L	A	A	E	G	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	L	N	I	E	I	P	K	D	V	M	T	A	T	F	N	D	S	Y	L	T	E	I	A	S	P	P	Q	T	C	I	D	I	K	P	R	M	L	G	Q	Q	A	G	S	A	I	L	N	I	L	K	N	D	V
Template Known Secondary structure			T	T			T	T	T	T							S		S					T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions