Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6L2
Confidence62.42%DateThu Jan 5 11:03:25 GMT 2012
Rank418Aligned Residues103
% Identity9%Templatec3h12B_
PDB info PDB header:isomeraseChain: B: PDB Molecule:mandelate racemase; PDBTitle: crystal structure of putative mandelate racemase from bordetella2 bronchiseptica rb50
Resolution1.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   17..20.........30.........40.........50.........60.........70........ .80.........90.....
Predicted Secondary structure 






















.



Query SS confidence 





























































.
















Query Sequence  GNVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTG. ANATAEAISLTQRFNDS
Query Conservation 
 

       
  
   

 

   




   

 


  
             

 

 .  
    
  
  
   
Alig confidence 




























......


























.
















Template Conservation                    
    




 ......    
   
  

   
    
 



       
      
   
Template Sequence  WDLTPDQAADELAGWVEQGFTAAKLKVGR. . . . . . APRKDAANLRAMRQRVGADVEILVDANQSLGRHDALAMLRILDEA
Template Known Secondary structure  SS

T
S
SS......

SSS
TT


T
Template Predicted Secondary structure 










......












Template SS confidence 















































































   148.150.........160.........170...... ...180.........190.........200.........210.........220.
 
   96...100.........110.........120... ......130..
Predicted Secondary structure 











.



Query SS confidence 



























.








Query Sequence  GIVGCLTVTPYYNRPSQEGLYQHFKAIA. EHTDLPQIL
Query Conservation 


 
 
  
     
   
      

.     



Alig confidence 


.......

















.








Template Conservation   
 ....... 



    
      
      



 
Template Sequence  GCY. . . . . . . WFEEPLSIDDIEGHRILRAQGTPVRIAT
Template Known Secondary structure  T
S.......S
S
TT
TT

SS
Template Predicted Secondary structure 

.......











Template SS confidence 





































   222.. .....230.........240.........250..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions