 |
Job Description | P0A6L2 | Confidence | 67.30% | Date | Thu Jan 5 11:03:25 GMT 2012 |
Rank | 390 | Aligned Residues | 54 |
% Identity | 13% | Template | c3epmB_ |
PDB info |
PDB header:biosynthetic protein | Chain: B: PDB Molecule:thiamine biosynthesis protein thic; |
PDBTitle: crystal structure of caulobacter crescentus thic
|
Resolution | 2.79 Å |
|
  |   |
70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 |
Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | I | P | V | I | A | G | T | G | A | N | A | T | A | E | A | I | S | L | T | Q | R | F | N | D | S | G | I | V | G | C | L | T | V | T | P | Y | Y | N | R | P | S | Q | E | G | L | Y | Q | H | F | K | A | I | A | E | H | T | D | L | P | Q |
Query Conservation |   |
  |   |   |
|
|   |
|
|   |   |   |
|   |   |   |   |
|   |   |
|   |   |
|   |   |   |
|
|
|   |
|   |
|   |   |
|   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|
|   |   |   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|
|
| . |
|
|   |
|   |
|
|
|
|   |   |   |
|   |   |   |
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|   |   |
|
|   |   |
|
|   |   |
|   |
|
|
|
Template Sequence |   |
L | V | K | I | N | A | N | I | G | . |
N | T | V | A | D | E | V | D | K | L | V | W | A | T | R | W | G | A | D | T | V | X | D | L | . |
. |
. |
. |
. |
. |
S | T | G | R | N | I | H | N | I | R | D | W | I | I | R | N | S | S | V | P | I |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |
| . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |
| . | . | . | . | . | . |
|
| S | T | T |  |  |  |  |  |  |  |  |  |  | T |
| S | S |
|  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
| . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
| . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
213 | . | . | . | . | . | . | 220 | . | |
. | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | |
|
|
|
|
|
. | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|