Job Description P0A6L2 Confidence 88.17% Date Thu Jan 5 11:03:25 GMT 2012 Rank 244 Aligned Residues 136 % Identity 13% Template c3aamA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:endonuclease iv; PDBTitle: crystal structure of endonuclease iv from thermus thermophilus hb8 Resolution 1.58 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50				.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80													.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	L	K	K	L	I	D	Y	H	V	A	S	G	T	S	A	I	V	S	V	G	T	T	G	E	S	A	T	.	.	.	L	N	H	D	E	H	A	D	V	V	M	M	T	L	D	L	A	D	G	R	I	P	V	I	A	G	T	G	A	N	.	.	.	.	.	.	.	.	.	.	.	.	A	T	A	E	A	I	S
Query Conservation																														.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.																.	.														.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																.	.
Template Sequence		G	V	A	G	A	V	E	E	A	T	A	L	G	L	T	A	F	Q	I	F	A	K	S	P	R	S	W	R	P	R	A	L	S	P	A	E	V	E	A	F	R	A	L	R	E	A	.	.	S	G	G	L	P	A	V	I	H	A	S	Y	L	V	N	L	G	A	E	G	E	L	W	E	K	S	V	A	S	L	A	D
Template Known Secondary structure														T		S						S	S		T	T			S																			.	.	T	T										T	T			T	T		S	S	T
Template Predicted Secondary structure																																																.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60			.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.		.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																									.																													.
Query SS confidence																									.																													.
Query Sequence		L	T	Q	R	F	N	D	S	G	I	V	G	C	L	T	V	T	P	Y	Y	N	R	P	.	S	Q	E	G	L	Y	Q	H	F	K	A	I	A	E	H	T	D	L	P	Q	I	L	Y	N	V	P	S	R	.	T	G	C	D	L	L	P	E	T	V	G	R	L	A	K	V	K	N	I	I	G	I
Query Conservation																									.																													.
Alig confidence																									.																													.
Template Conservation
Template Sequence		D	L	E	K	A	A	L	L	G	V	E	Y	V	V	V	H	P	G	S	G	R	P	E	R	V	K	E	G	A	L	K	A	L	R	L	A	G	V	R	S	R	P	V	L	L	V	E	N	T	A	G	G	G	E	K	V	G	A	R	F	E	E	L	A	W	L	V	A	D	T	P	L	Q	V	C
Template Known Secondary structure										T										B	S																	T			S	S	S											T	T	B	S			S									T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions