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Job DescriptionP0A6L2
Confidence100.00%DateThu Jan 5 11:03:25 GMT 2012
Rank11Aligned Residues290
% Identity42%Templatec2rfgB_
PDB info PDB header:lyaseChain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from hahella2 chejuensis at 1.5a resolution
Resolution1.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  MFTGSIVAIVTPMDEKGNVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTGAN
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Template Sequence  MFRGSLIAMITPFI. NGQVDEKALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAGSN
Template Known Secondary structure 






.TT
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STTSGGGTGGGS
TTSS
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   1........10.... .....20.........30.........40.........50.........60.........70.........
 
   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  ATAEAISLTQRFNDSGIVGCLTVTPYYNRPSQEGLYQHFKAIAEHTDLPQILYNVPSRTGCDLLPETVGRLAKVKNIIGI
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Template Sequence  NPVEAVRYAQHAQQAGADAVLCVAGYYNRPSQEGLYQHFKMVHDAIDIPIIVYNIPPRAVVDIKPETMARLAALPRIVGV
Template Known Secondary structure  STT
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   80.........90.........100.........110.........120.........130.........140.........150.........
 
   161........170.........180.........190.........200.........210.........220.........230.........240
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Query Sequence  KEATGNLTRVNQIKELVSDDFVLLSGDDASALDFMQLGGHGVISVTANVAARDMAQMCKLAAEGHFAEARVINQRLMPLH
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Template Sequence  KDATTDLARISRERMLINKPFSFLSGDDMTAIAYNASGGQGCISVSANIAPALYGQMQTATLQGDFREALRIHDLLAPLH
Template Known Secondary structure 
S

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GGGTT

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   160.........170.........180.........190.........200.........210.........220.........230.........
 
   241........250.........260.........270.........280.........290..
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Query Sequence  NKLFVEPNPIPVKWACKELGLVATDTLRLPMTPITDSGRETVRAALKHAGLL
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Template Sequence  EALFREPSPAGAKYAASLLGL. CNEECRLPIVPLSEQTKSDIKNIINELYRL
Template Known Secondary structure  SSSTTTTS.S




TTS



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   240.........250.........260 .........270.........280.........290
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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