|   |
53 | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | |
. | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | |
|
|
|
. | . | 100 | . | . | . | . | . | . | . | . | . | 110 | |
. | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . |
|  |  |  |  |
|
|
|
|
|
|
|
| . |
|  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Sequence |   |
H | D | E | H | A | D | V | V | M | M | T | L | D | L | A | D | G | R | I | P | V | I | A | G | . |
T | G | A | N | A | T | A | E | A | I | S | L | T | Q | R | F | N | D | S | G | I | . |
. |
. |
. |
V | G | C | L | T | V | T | P | Y | Y | N | R | P | . |
S | Q | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Conservation |   |
  |
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
| . |
|   |   |   |
|   |   |   |   |
|   |   |
|   |   |
|   |   |   |
|
| . | . | . | . |
|   |
|   |
|   |   |
|   |   |   |   |   | . |
|   | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
|   |   |   |
|   |   |
|   |   |
|
|   |
|   |
|   |
|
|
|
|
|   |
|
|
|
|
|
|
|   |   |   |
|
|
|   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|
|
|
|   |   |   |   |
|
|
|
|
|   |
|
|
|
|
|
|   |
|
|   |   |   |   |
Template Sequence |   |
A | K | R | G | R | R | E | A | I | D | I | I | T | G | K | D | D | R | V | L | V | I | V | G | P | C | S | I | H | D | L | E | A | A | Q | E | Y | A | L | R | L | K | K | L | S | D | E | L | K | G | D | L | S | I | I | M | R | A | Y | L | E | K | P | R | T | T | V | G | W | K | G | L | I | N | D | P | D | V | N | N |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
|
| S |  |  |  |  |  |  |
| S |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |  |  |  |  |  |  |
|
|
|
|
|
|
| S | S | S | S |
|
|
| T | T | T |
| T | T | S | S | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
51 | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 |
  |
  |   |
|
|
|
|
113 | . | . | . | . | . | . | 120 | . | . | |
|
|
. | . | . | . | . | . | . | 130 | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | |
. | . | . |
Predicted Secondary structure |   |
. | . | . | . |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |
|
|
|
|  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
| . |
|
|  |
Query SS confidence |   |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
Query Sequence |   |
. |
. |
. |
. |
E | G | L | Y | Q | H | F | K | A | I | . |
. |
. |
A | E | H | T | D | L | P | Q | I | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | Y | N | V | P | S | R | T | G | C | D | L | L | P | E | T | V | G | R | L | A | K | V | K | N | I | I | G | I | K | E | A | T | . |
G | N | L |
Query Conservation |   |
. | . | . | . |   |   |
|   |   |   |   |   |   |
| . | . | . |
|   |   |   |   |   |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|   |
|   |   |
|
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |
|   |
|
|
|   |
|   | . |   |
|   |
Alig confidence |   |
. | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
Template Conservation |   |
  |   |   |
|
|   |
|
|   |   |   |
|   |
|   |   |   |   |   |   |   |
|
|
|
|   |
|
|   |
|
|   |   |   |   |   |
|   |   |
|   |
|   |   |   |   |
|
|
|
|
| . | . |   |
|
|
|   |
|
|
|   |
|
|   |   |   |   |
|
|
|   |
|
|
|   |   |
|   |
|
Template Sequence |   |
T | F | N | I | N | K | G | L | Q | S | A | R | Q | L | F | V | N | L | T | N | I | G | L | P | I | G | S | E | M | L | D | T | I | S | P | Q | Y | L | A | D | L | V | S | F | G | A | I | G | A | R | T | . |
. |
T | E | S | Q | L | H | R | E | L | A | S | G | L | S | F | P | V | G | F | K | N | G | T | D | G | T | L |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
|
|  |  |  |  |
|
| S | S | S | T |  |  |  |  | G | G | G |
| S |  |  |  |  |
| T | T | T | . | . | T | T |
|  |  |  |  |  |  |  |  | T |
| S | S |
|  |  |  |  |
|
| T | T | S |
| S |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|  |  |  |  |
|
|
|
| . | . |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
131 | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | |
|
. | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . |
  |
  |   |
168 | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | R | V | N | Q | I | K | E | L | V | S | D | D | F | V | L | L | S |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |
|
|   |
|
|   |   |   |
|   |
|
|   |
Template Sequence |   |
N | V | A | V | D | A | C | Q | A | A | A | H | S | H | H | F | M | G |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | T | S |
|
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
209 | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . |
  |