Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6L2
Confidence45.30%DateThu Jan 5 11:03:25 GMT 2012
Rank494Aligned Residues101
% Identity9%Templatec1mv8A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:gdp-mannose 6-dehydrogenase; PDBTitle: 1.55 a crystal structure of a ternary complex of gdp-mannose2 dehydrogenase from psuedomonas aeruginosa
Resolution1.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30. ........40.........50.........60......... 70......
Predicted Secondary structure 















...














.

....
Query SS confidence 


























. . .





































.






. . . .
Query Sequence  SIVAIVTPMDEKGNVCRASLKKLIDYH. . . VASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADG. RIPVIAG. . . .
Query Conservation 
  
  


   
 

       
  
...   

 

   




   

 


  
          .   

 
....
Alig confidence 


























...





































.






....
Template Conservation 


 



       
   
      
   
        

  


 



      
 
         
  
   

  
Template Sequence  SFICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVVRSTVLPGTVNNVVIPLIEDCSGKKAGVDFGVGTNPEFL
Template Known Secondary structure 




B
TTSSB

TT

S


S


TTTS

BTTTB




Template Predicted Secondary structure 



































Template SS confidence 















































































   80.........90.........100.........110.........120.........130.........140.........150.........
 
   77..80.........90.........100.....
Predicted Secondary structure  ...............











Query SS confidence  . . . . . . . . . . . . . . .




























Query Sequence  . . . . . . . . . . . . . . . TGANATAEAISLTQRFNDSGIVGCLTVTP
Query Conservation  ...............
   
    
  
  
   


 
 
  
Alig confidence  ...............




























Template Conservation    
 
         




 
         
       

    
Template Sequence  RESTAIKDYDFPPMTVIGELDKQTGDLLEEIYRELDAPIIRKTV
Template Known Secondary structure 
TTSS
S
SSTTSSS
Template Predicted Secondary structure 
















Template SS confidence 











































   160.........170.........180.........190.........200...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions