Return to main results Retrieve Phyre Job Id

Job DescriptionP39355
Confidence0.99%DateThu Jan 5 11:59:44 GMT 2012
Rank41Aligned Residues42
% Identity19%Templatec3pjzA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:potassium uptake protein trkh; PDBTitle: crystal structure of the potassium transporter trkh from vibrio2 parahaemolyticus
Resolution3.51 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3940.........50.........60.........70.........80.
Predicted Secondary structure 






Query SS confidence 










































Query Sequence  IISPIAFGIIIDKTGNWSLPFYGSVALLVIGIFLTFFMRPDKS
Query Conservation     
 
 
 
   



   
   
     
 
    
   
 
Alig confidence 












.




























Template Conservation     
   
     .     
                       
Template Sequence  MLAPALVALLYRD. GAGVPFVTTFFVLLFCGAMCWFPNRRHKH
Template Known Secondary structure  TTSS
.


TTTSTTT




Template Predicted Secondary structure 

.







Template SS confidence 










































   21........30... ......40.........50.........60..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions