Job Description P39355 Confidence 96.28% Date Thu Jan 5 11:59:44 GMT 2012 Rank 5 Aligned Residues 79 % Identity 9% Template c2xutC_ PDB info PDB header:transport protein Chain: C: PDB Molecule:proton/peptide symporter family protein; PDBTitle: crystal structure of a proton dependent oligopeptide (pot)2 family transporter. Resolution 3.62 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20					.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.
Query SS confidence																					.	.	.	.
Query Sequence		L	A	D	E	L	T	I	G	P	I	R	A	V	P	M	D	I	T	P	.	.	.	.	K	Y	V	G	I	A	S	G	L	M	N	A	G	S	A	V	A	D	I	I	S	P	I	A	F	G	I	I	I	D	K	T	G	N	W	S	L	P	F	Y	G	S	V	A	L	L	V	I	G	I	F	L	T	F	F	M	R
Query Conservation																					.	.	.	.
Alig confidence																					.	.	.	.																																		.
Template Conservation																																																										.
Template Sequence		L	G	S	G	G	I	K	P	L	V	S	S	F	M	G	D	Q	F	D	Q	S	N	K	S	L	A	Q	K	A	F	D	M	F	Y	F	T	I	N	F	G	S	F	F	A	S	L	S	M	P	L	L	L	K	N	F	G	.	A	A	V	A	F	G	I	P	G	V	L	M	F	V	A	T	V	F	F	W	L	G	R
Template Known Secondary structure						T	T											T		S	T	T	T	T	T																							T	S	T					T	S		.																					S	S	S
Template Predicted Secondary structure																																																										.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		78	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	K	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	R	Y	I
Template Known Secondary structure		S	S
Template Predicted Secondary structure
Template SS confidence
		200	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions