Return to main results Retrieve Phyre Job Id

Job DescriptionP39355
Confidence0.58%DateThu Jan 5 11:59:44 GMT 2012
Rank100Aligned Residues33
% Identity15%Templatec1qleB_
PDB info PDB header:oxidoreductase/immune systemChain: B: PDB Molecule:cytochrome c oxidase polypeptide ii; PDBTitle: cryo-structure of the paracoccus denitrificans four-subunit2 cytochrome c oxidase in the completely oxidized state3 complexed with an antibody fv fragment
Resolution3.0 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4950.........60.........70.........80.
Predicted Secondary structure 






Query SS confidence 
































Query Sequence  IDKTGNWSLPFYGSVALLVIGIFLTFFMRPDKS
Query Conservation     



   
   
     
 
    
   
 
Alig confidence 
































Template Conservation 
  
      
   
 
 
   
     
 
  
Template Sequence  QQWLDHFVLYIITAVTIFVCLLLLICIVRFNRR
Template Known Secondary structure  SSTT
Template Predicted Secondary structure 


Template SS confidence 
































   31........40.........50.........60...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions