 |
| Job Description | Q47539 | | Confidence | 0.92% | Date | Wed Jan 25 15:21:14 GMT 2012 |
| Rank | 59 | Aligned Residues | 18 |
| % Identity | 11% | Template | d1ttya_ |
| SCOP info | DNA/RNA-binding 3-helical bundle
| Sigma3 and sigma4 domains of RNA polymerase sigma factors
| Sigma4 domain
|
| Resolution | UNK |
|
| | |
169 | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . |
| Predicted Secondary structure | |
|  | | | | | | | | | |
|
|
|
|
|
|  |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
Q | Q | V | R | I | R | A | A | Q | S | L | G | A | S | R | A | Q | V |
| Query Conservation | |
| | | | |
|
|
| | | |
|
|
| | | | |
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
| |
| | |
|
|
| | |
|
|
|
| | | |
|
| Template Sequence | |
P | K | T | L | E | E | V | G | Q | Y | F | N | V | T | R | E | R | I |
| Template Known Secondary structure | |
|
|
| | | | | | | | | T |
|
| | | | |
| Template Predicted Secondary structure | |
|
|
| | | | | | | | |
|
|
| | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
