Return to main results Retrieve Phyre Job Id

Job DescriptionQ47539
Confidence0.84%DateWed Jan 25 15:21:14 GMT 2012
Rank68Aligned Residues22
% Identity9%Templated1or7a1
SCOP infoDNA/RNA-binding 3-helical bundle Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma4 domain
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   169170.........180.........190
Predicted Secondary structure 






Query SS confidence 





















Query Sequence  QQVRIRAAQSLGASRAQVLWFV
Query Conservation       


   


       
Alig confidence 





















Template Conservation 
 
  


  

 
  

   
Template Sequence  GLSYEEIAAIMDCPVGTVRSRI
Template Known Secondary structure 


TTS
Template Predicted Secondary structure 





Template SS confidence 





















   153......160.........170....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions