Job Description Q47539 Confidence 1.55% Date Wed Jan 25 15:21:14 GMT 2012 Rank 30 Aligned Residues 94 % Identity 18% Template c3rkoF_ PDB info PDB header:oxidoreductase Chain: F: PDB Molecule:nadh-quinone oxidoreductase subunit j; PDBTitle: crystal structure of the membrane domain of respiratory complex i from2 e. coli at 3.0 angstrom resolution Resolution 3.00 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	L	H	S	R	R	L	K	W	R	W	P	L	S	R	Q	V	T	L	S	I	G	T	L	A	V	L	L	T	V	W	W	T	V	A	T	L	Q	L	I	S	P	L	F	L	P	P	P	Q	Q	V	L	E	K	L	L	T	I	A	G	P	Q	G	F	M	D	A	T	L	W	Q	H	L	A	A	S	L	T	R
Query Conservation
Alig confidence																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	L	G	G	S	E	I	E	Q	E	R	Q	W	L	K	P	Q	V	W	I	G	P	A	I	L	S	A	I	M	L	V	V	I	V	Y	A	I	L	G	V	N	D	Q	G	I	D	G	T	P	I	S	A	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	V	G	I	T	L	F	G	P	Y	V	L
Template Known Secondary structure				S	S	T	T						T	T		S																							T	T	S														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T	T	S
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.																.	.	130	.	.	.	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	M	L	A	L	F	A	A	V	L	F	G	I	P	V	G	I	A	M	G	L	S	P	T	V	R	G	I	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	V	E	L	A	S	M	L	L	L	A	G	L	V	V	A	F	H	V	G	R	E	E	R	A	G	E	V	L
Template Known Secondary structure																											S	S
Template Predicted Secondary structure
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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