Job Description Q47539 Confidence 100.00% Date Wed Jan 25 15:21:14 GMT 2012 Rank 6 Aligned Residues 199 % Identity 14% Template c2r6gF_ PDB info PDB header:hydrolase/transport protein Chain: F: PDB Molecule:maltose transport system permease protein malf; PDBTitle: the crystal structure of the e. coli maltose transporter Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.					.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.																																			.
Query SS confidence																	.	.	.	.																																			.
Query Sequence		K	L	L	T	I	A	G	P	Q	G	F	M	D	A	T	.	.	.	.	L	W	Q	H	L	A	A	S	L	T	R	I	M	L	A	L	F	A	A	V	L	F	G	I	P	V	G	I	A	M	G	L	S	P	.	T	V	R	G	I	L	D	P	I	I	E	L	Y	R	P	V	P	P	L	A	Y	L	P	L	M	V
Query Conservation																	.	.	.	.																																			.
Alig confidence																	.	.	.	.																																			.
Template Conservation
Template Sequence		T	T	G	W	K	N	F	T	R	V	F	T	D	E	G	I	Q	K	P	F	L	A	I	F	V	W	T	V	V	F	S	L	I	T	V	F	L	T	V	A	V	G	M	V	L	A	C	L	V	Q	W	E	A	L	R	G	K	A	V	Y	R	V	L	L	I	L	P	Y	A	V	P	S	F	I	S	I	L	I	F	K
Template Known Secondary structure		B		T	T	T	T	T	S	G	G	G	T		T	T	T	S	T	T																															T		S	S	S	T	T								T	T					S
Template Predicted Secondary structure
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
		136	.	.	.	140	.																										.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	W	F	G	I	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	T	S	K	I	L	L	I	Y	L	A	I	F	A	P	V	A	M	S	A	L	A	G	V	K	S	V	Q	Q	V	R	I	R	A	A	Q	S	L	G	A	S	R	A	Q	V	L	W	F	V
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	L	F	N	Q	S	F	G	E	I	N	M	M	L	S	A	L	F	G	V	K	P	A	W	F	S	D	P	T	T	A	R	T	M	L	I	I	V	N	T	W	L	G	Y	P	Y	M	M	I	L	C	M	G	L	L	K	A	I	P	D	D	L	Y	E	A	S	A	M	D	G	A	G	P	F	Q	N	F	F	K	I
Template Known Secondary structure				T		S	S	S	S									T	S	S					T	T	T	S																												G	G	G	S		T									T				S							T
Template Predicted Secondary structure
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220															.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.					.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Query Sequence		I	L	P	G	A	L	P	E	I	L	T	G	L	R	I	G	L	G	V	G	W	S	T	L	V	A	A	E	L	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	T	R	G	L	G	F	M	V	Q	S	A	G	E	F	L	.	.	.	.	A	T	D	V	V	L	A	G	I	A	V	I	A	I	I
Query Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Template Conservation
Template Sequence		T	L	P	L	L	I	K	P	L	T	P	L	M	I	A	S	F	A	F	N	F	N	N	F	V	L	I	Q	L	L	T	N	G	G	P	D	R	L	G	T	T	T	P	A	G	Y	T	D	L	L	V	N	Y	T	Y	R	I	A	F	E	G	G	G	G	Q	D	F	G	L	A	A	A	I	A	T	L	I	F	L	L
Template Known Secondary structure		T	G	G	G	T																	T										S	S		S	B		S	S		S	S			B	S	S												T	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		418	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.
		253	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	L	L	E	L	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	G	A	L	A	I	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		498	.	500	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions