 |
Job Description | P0AC65 | Confidence | 97.24% | Date | Thu Jan 5 11:17:18 GMT 2012 |
Rank | 172 | Aligned Residues | 69 |
% Identity | 17% | Template | c3ul3A_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:thioredoxin; |
PDBTitle: structural insights into thioredoxin-2: a component of malaria2 parasite protein secretion machinery
|
Resolution | 2.90 Å |
|
 |
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | |
|
|
|
|
|
. | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | |
|
|
|
|
. | 60 | . | . | . | . | |
. | . | . | . | . | 70 |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
| . | . | . | . | . |  |  |  |  |
|
| . |
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
| . |
|
|
|
|
|
|
Query Sequence |   |
I | T | I | Y | T | R | N | D | C | V | Q | C | H | A | T | K | R | A | M | E | . |
. |
. |
. |
. |
. |
N | R | G | F | D | F | E | M | I | N | V | D | R | V | P | E | A | A | E | A | L | R | A | Q | G | F | R | Q | L | P | V | V | I | A | G | D | . |
. |
. |
. |
. |
L | S | W | S | G | F | . |
R | P | D | M | I | N |
Query Conservation |   |
|   |
|
|   |   |   |   |
|   |   |
|   |   |   |
|   |   |
|   | . | . | . | . | . | . |   |   |   |
|   |
|   |   |   |
|
|   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|
|   |
|   |
|   |   | . | . | . | . | . |   |   |
|   |
|
| . |   |   |
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
| . |
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|   |
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   | . | . | . |   |   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |
|   |
Template Sequence |   |
V | L | Y | F | F | A | K | W | C | Q | A | C | T | M | Q | S | T | E | M | D | K | L | Q | K | Y | Y | G | K | R | I | Y | L | L | K | V | D | L | D | K | N | E | S | L | A | . |
. |
. |
R | K | F | S | V | K | S | L | P | T | I | I | L | L | K | N | K | T | M | L | A | R | K | D | H | F | V | S | S | N | D | L | I |
Template Known Secondary structure |   |
 |  |  |  |  |
| T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  |  |  |  | T | T | T |
|  |  |  |  | . | . | . |  |  | T | T |
|
| S | S | S |  |  |  |  |  |  | T | T |  |  |  |  |  |  | S | S |
|
|
|  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  | . | . | . |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
74 | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | |
|
|
. | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 |
  |
  |   |
71 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
Query SS confidence |   |
|
|
|
|
Query Sequence |   |
R | L | H | P |
Query Conservation |   |
  |
|   |   |
Alig confidence |   |
|
|
|
|
Template Conservation |   |
  |   |
|   |
Template Sequence |   |
A | L | I | K |
Template Known Secondary structure |   |
 |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
Template SS confidence |   |
|
|
|
|
  |   |
151 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|