Return to main results Retrieve Phyre Job Id

Job DescriptionP0AC65
Confidence80.88%DateThu Jan 5 11:17:18 GMT 2012
Rank349Aligned Residues76
% Identity14%Templatec3hdcA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:thioredoxin family protein; PDBTitle: the crystal structure of thioredoxin protein from geobacter2 metallireducens
Resolution1.77 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.... .....30.........40 .........50........
Predicted Secondary structure 




.....






..................








.
Query SS confidence 





















. . . . .















. . . . . . . . . . . . . . . . . .

















.
Query Sequence  ITIYTRNDCVQCHATKRAMENR. . . . . GFDFEMINVDRVPEAA. . . . . . . . . . . . . . . . . . EALRAQGFRQLPVVIAGD.
Query Conservation 
 

    
  
   
  
   ..... 
 
   

  
    ..................  
   
   

 
 
  .
Alig confidence 





















.....















..................

















.
Template Conservation 

 
    
  
         
          

 
                                    
   


 
Template Sequence  LVNFWASWCPYCRDEXPSXDRLVKSFPKGDLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQVQQRYGANRLPDTFIVDR
Template Known Secondary structure 
TT
SSTTS
SSS

GGGGG


S

TTSTT

SSS
T
Template Predicted Secondary structure 

































Template SS confidence 















































































   63......70.........80.........90.........100.........110.........120.........130.........140..
 
   5960.........70........
Predicted Secondary structure  .....


Query SS confidence  . . . . .



















Query Sequence  . . . . . LSWSGFRPDMINRLHPAPHA
Query Conservation  .....  
 

  
 
  
  
   
Alig confidence  .....



















Template Conservation   
 
     
       

   
  
Template Sequence  KGIIRQRVTGGIEWDAPKVVSYLKS
Template Known Secondary structure  TSBS


TTST
Template Predicted Secondary structure 







Template SS confidence 
























   143......150.........160.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions