 |
| Job Description | P0AC65 | | Confidence | 27.83% | Date | Thu Jan 5 11:17:18 GMT 2012 |
| Rank | 442 | Aligned Residues | 30 |
| % Identity | 13% | Template | c3eihB_ |
| PDB info |
PDB header:protein transport | Chain: B: PDB Molecule:vacuolar protein sorting-associated protein 4; |
PDBTitle: crystal structure of s.cerevisiae vps4 in the presence of atpgammas
|
| Resolution | 3.25 Å |
|
| | |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . |
| Predicted Secondary structure | |
 | | | |  |
|
|
|
|  | | | | | | | | | | | |
|
|
|
|
| | | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
I | T | I | Y | T | R | N | D | C | V | Q | C | H | A | T | K | R | A | M | E | N | R | G | F | D | F | E | M | I | N |
| Query Conservation | |
| |
|
| | | | |
| | |
| | | |
| | |
| | | | |
| |
| | | |
|
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
|
|
| |
|
|
|
|
|
|
|
| |
|
| |
|
|
| | |
| | | | | | | | |
| Template Sequence | |
I | L | L | Y | G | P | P | G | T | G | K | S | Y | L | A | K | A | V | A | T | E | A | N | S | T | F | F | S | V | S |
| Template Known Secondary structure | |
| | | |
| S | T | T | S |
| | | | | | | | | | | T | T | T |
| | | | | | |
| Template Predicted Secondary structure | |
| | | |
|
|
|
|
|
| | | | | | | | | | | | |
|
|
| | | |
|
|
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
169 | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
