 |
Job Description | P0AC65 | Confidence | 96.85% | Date | Thu Jan 5 11:17:18 GMT 2012 |
Rank | 217 | Aligned Residues | 69 |
% Identity | 16% | Template | c3apsA_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:dnaj homolog subfamily c member 10; |
PDBTitle: crystal structure of trx4 domain of erdj5
|
Resolution | 1.90 Å |
|
 |
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | |
|
|
|
|
|
. | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | . | . | 60 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | T | I | Y | T | R | N | D | C | V | Q | C | H | A | T | K | R | A | M | E | N | R | . |
. |
. |
. |
. |
. |
G | F | D | F | E | M | I | N | V | D | R | V | P | E | A | A | E | A | L | R | A | Q | G | F | R | Q | L | P | V | V | I | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | D | L | S | W | S | G | F | R | P |
Query Conservation |   |
|   |
|
|   |   |   |   |
|   |   |
|   |   |   |
|   |   |
|   |   |   | . | . | . | . | . | . |   |
|   |
|   |   |   |
|
|   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|
|   |
|   |
| . | . | . | . | . | . | . | . | . | . |   |   |   |   |
|   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|
|   |
|
|   |   |
|   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . |   |   |   |   |
|   |   |   |
|
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
Template Sequence |   |
V | V | D | F | Y | A | P | W | C | G | P | C | Q | N | F | A | P | E | F | E | L | L | A | R | M | I | K | G | K | V | R | A | G | K | V | D | C | Q | A | Y | P | Q | T | C | . |
. |
. |
Q | K | A | G | I | K | A | Y | P | S | V | K | L | Y | Q | Y | E | R | A | K | K | S | I | W | E | E | Q | I | N | S | R | D | A |
Template Known Secondary structure |   |
 |  |  |  |  |
| T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
|  |  |  |  |  |  | T | T | T |
|  |  |  |  | . | . | . |  |  | T | T |
|
| S | S | S |  |  |  |  |  |  |  |  | G | G | G | T |  |  |  |  |  |  |  |
|
| S |
|  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  | . | . | . |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
692 | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | . | . | . | . | . | . | 720 | . | . | . | . | . | . | . | . | . | 730 | . | . | . | . | . | |
|
|
. | . | . | . | 740 | . | . | . | . | . | . | . | . | . | 750 | . | . | . | . | . | . | . | . | . | 760 | . | . | . | . | . | . | . | . |
  |
  |   |
67 | . | . | 70 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
Query Sequence |   |
D | M | I | N | R | L | H | P |
Query Conservation |   |
|   |
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |
|
|   |
Template Sequence |   |
K | T | I | A | A | L | I | Y |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
  |   |
769 | 770 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|