 |
Job Description | P0AC65 | Confidence | 97.14% | Date | Thu Jan 5 11:17:18 GMT 2012 |
Rank | 181 | Aligned Residues | 71 |
% Identity | 18% | Template | c2yv9B_ |
PDB info |
PDB header:metal transport | Chain: B: PDB Molecule:chloride intracellular channel exc-4; |
PDBTitle: crystal structure of the clic homologue exc-4 from c.2 elegans
|
Resolution | 1.60 Å |
|
 |
  |   |
2 | . | . | . | . | . | . | . | 10 | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 20 | . | |
|
|
|
. | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | I | T | I | Y | T | R | N | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
C | V | Q | C | H | A | T | K | R | A | M | . |
. |
. |
. |
E | N | R | G | F | D | F | E | M | I | N | V | D | R | V | P | E | A | A | E | A | L | R | A | Q | G | F | R | Q | L | P | V | V | I | A | G | D | L | S | W | S | G | F | R | P | D | M |
Query Conservation |   |
|
|   |
|
|   |   |   |   | . | . | . | . | . | . | . | . | . |
|   |   |
|   |   |   |
|   |   |
| . | . | . | . |   |   |   |   |
|   |
|   |   |   |
|
|   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|
|   |
|   |
|   |   |   |   |
|   |
|
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |
|
|
|   |   |   |
|   |   |   |
|
|   |
|
|
|   |
|
|
|   |
|   |
|   |   |
|   |
|
|
|
|
|   |   |
|
|   |   |
|
|
|
|   |   |   | . | . |
|   |   |
|
|
|   |
|   |
|
|
|
|
|   |   |   |   |
|   |
|
|   |
|
|   |   |
Template Sequence |   |
L | L | E | L | Y | V | K | A | S | G | I | D | A | R | R | I | G | A | D | L | F | C | Q | E | F | W | M | E | L | Y | A | L | Y | E | I | G | V | A | R | V | E | V | K | T | V | N | V | N | S | E | A | . |
. |
F | K | K | N | F | L | G | A | Q | P | P | I | M | I | E | E | E | K | E | L | T | Y | T | D | N | R | E |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | B |
| S | S |
| T | T | S | B |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
|  |  |  |  |  |  |  |
| T | T | S |  |  | . | . |  |  |  |  |  | T | T |
|
| S |
|  |  |  |  | G | G | G | T |  |  |  |
| S |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  | . | . |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
18 | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | |
|
. | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . |
  |
  |   |
69 | 70 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
Query Sequence |   |
I | N | R | L | H | P |
Query Conservation |   |
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|
|
Template Sequence |   |
I | E | G | R | I | F |
Template Known Secondary structure |   |
 |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
  |   |
96 | . | . | . | 100 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|