 |
Job Description | P0AC65 | Confidence | 96.39% | Date | Thu Jan 5 11:17:18 GMT 2012 |
Rank | 245 | Aligned Residues | 78 |
% Identity | 13% | Template | c1x5dA_ |
PDB info |
PDB header:isomerase | Chain: A: PDB Molecule:protein disulfide-isomerase a6; |
PDBTitle: the solution structure of the second thioredoxin-like2 domain of human protein disulfide-isomerase a6
|
Resolution | UNK |
|
 |
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
. | 60 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
| . | . | . | . | . | . |  |  |  |  |
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | T | I | Y | T | R | N | D | C | V | Q | C | H | A | T | K | R | A | M | E | N | R | G | F | D | F | . |
. |
. |
. |
. |
. |
. |
. |
E | M | I | N | V | D | R | V | P | E | A | A | E | A | L | R | A | Q | G | F | R | Q | L | P | V | V | I | A | G | D | . |
. |
. |
. |
. |
. |
L | S | W | S | G | F | R | P | D | M |
Query Conservation |   |
|   |
|
|   |   |   |   |
|   |   |
|   |   |   |
|   |   |
|   |   |   |   |
|   |
| . | . | . | . | . | . | . | . |   |   |   |
|
|   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|
|   |
|   |
|   |   | . | . | . | . | . | . |   |   |
|   |
|
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   | . |   |   |   |   |
|   |   |   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |
Template Sequence |   |
M | V | E | F | Y | A | P | W | C | G | H | C | K | N | L | E | P | E | W | A | A | A | A | S | E | V | K | E | Q | T | K | G | K | V | K | L | A | A | V | D | A | T | . |
V | N | Q | V | L | A | S | R | Y | G | I | R | G | F | P | T | I | K | I | F | Q | K | G | E | S | P | V | D | Y | D | G | G | R | T | R | S | D |
Template Known Secondary structure |   |
 |  |  |  |  |
| T | T |
|  |  |  |  | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | S |  |  |  |  |  |  |  | T | T | . | T |
|
|  |  |  |  |  |  | T |
|
| S | S | S |  |  |  |  |  |  | T | T |  |  |  |  |  |  |
| S |
|
| S |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
29 | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | |
. | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . |
  |
  |   |
69 | 70 | . | |
. | . | . | . | . | . | . | . | 80 | . |
Predicted Secondary structure |   |
 |  |  | . |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | N | R | . |
L | H | P | A | P | H | A | A | S | A |
Query Conservation |   |
|   |   | . |
|   |   |
|   |   |   |
|   |   |
Alig confidence |   |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |
Template Sequence |   |
I | V | S | R | A | L | D | L | F | S | D | N | A | P |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | S |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
108 | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|