Job Description P36547 Confidence 95.57% Date Thu Jan 5 11:53:11 GMT 2012 Rank 26 Aligned Residues 82 % Identity 10% Template c3dcfB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:transcriptional regulator of the tetr/acrr PDBTitle: crystal structure of transcriptional regulator of the2 tetr/acrr family (yp_290855.1) from thermobifida fusca yx-3 er1 at 2.50 a resolution Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.			.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure																																											.	.
Query SS confidence																																											.	.
Query Sequence		S	Y	R	R	L	L	S	R	A	R	E	Y	V	L	E	N	M	S	E	P	V	T	V	L	D	L	C	N	Q	L	H	V	S	R	R	T	L	Q	N	A	F	.	.	H	A	I	L	G	I	G	P	N	A	W	L	K	R	I	R	L	N	A	V	R	R	E	L	I	S	P	W	S	Q	S	M	T	V	K	D	A
Query Conservation																																											.	.
Alig confidence																																											.	.
Template Conservation
Template Sequence		R	R	T	Q	I	I	K	V	A	T	E	L	F	R	E	K	G	Y	Y	A	T	S	L	D	D	I	A	D	R	I	G	F	T	K	P	A	I	Y	Y	Y	F	K	S	K	E	D	V	L	F	A	I	V	N	S	I	V	D	E	A	L	E	R	F	H	A	I	A	A	G	P	G	S	P	G	E	R	I	H	A	L
Template Known Secondary structure																	T		T	T	T											T											S	S																									T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		315	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	Q	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	V	E	H
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		111	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions