Job Description P36547 Confidence 94.93% Date Thu Jan 5 11:53:11 GMT 2012 Rank 66 Aligned Residues 83 % Identity 16% Template c2rasB_ PDB info PDB header:transcription Chain: B: PDB Molecule:transcriptional regulator, tetr family; PDBTitle: crystal structure of a putative tetr/acrr family transcriptional2 regulator (saro_0558) from novosphingobium aromaticivorans dsm at3 1.80 a resolution Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.			.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure																																												.	.
Query SS confidence																																												.	.
Query Sequence		Q	S	Y	R	R	L	L	S	R	A	R	E	Y	V	L	E	N	M	S	E	P	V	T	V	L	D	L	C	N	Q	L	H	V	S	R	R	T	L	Q	N	A	F	.	.	H	A	I	L	G	I	G	P	N	A	W	L	K	R	I	R	L	N	A	V	R	R	E	L	I	S	P	W	S	Q	S	M	T	V	K	D
Query Conservation																																												.	.
Alig confidence																																												.	.
Template Conservation
Template Sequence		A	X	R	A	R	L	V	D	V	A	Q	A	I	V	E	E	R	G	G	A	G	L	T	L	S	E	L	A	A	R	A	G	I	S	Q	A	N	L	S	R	Y	F	E	T	R	E	D	L	X	E	A	I	A	D	Y	W	F	H	P	X	V	E	I	X	E	D	V	L	A	S	D	L	P	P	R	R	K	X	Y	E
Template Known Secondary structure																				G	G	G											T	S							T	T		S	S												T	T													S
Template Predicted Secondary structure
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		314	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	M	Q	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	F	A	R	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions