Job Description P36547 Confidence 69.07% Date Thu Jan 5 11:53:11 GMT 2012 Rank 276 Aligned Residues 93 % Identity 5% Template c2pfwB_ PDB info PDB header:unknown function Chain: B: PDB Molecule:cupin 2, conserved barrel domain protein; PDBTitle: crystal structure of a rmlc-like cupin (sfri_3105) from shewanella2 frigidimarina ncimb 400 at 1.90 a resolution Resolution 1.90 Å

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		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.			.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																	.	.
Query SS confidence																																																																	.	.
Query Sequence		Q	Q	I	Y	D	Q	L	H	P	G	K	F	H	G	E	F	T	E	I	L	L	D	D	I	Q	V	F	R	E	Y	T	G	L	A	L	R	Q	S	C	L	V	W	P	N	S	F	W	F	G	I	P	A	T	R	G	E	Q	G	F	I	G	S	Q	.	.	C	L	G	S	A	E	I	A	T	R	P	G	G	T	E
Query Conservation																																																																	.	.
Alig confidence												.	.																							.																													.	.
Template Conservation												.	.																							.
Template Sequence		Q	T	E	I	E	D	I	G	G	G	.	.	L	K	R	Q	X	L	G	F	N	H	E	L	X	A	V	K	I	W	F	D	K	G	.	A	E	G	Y	V	H	A	H	R	H	S	Q	V	S	Y	V	V	E	G	E	F	H	V	N	V	D	G	V	I	K	V	L	T	A	G	D	S	F	F	V	P	P	H	V	D
Template Known Secondary structure		T	S						S	T	T	.	.										T	T										T	T	.									S	S																T	T							T	T							T	T
Template Predicted Secondary structure												.	.																							.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.			.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	E	L	S	T	P	D	D	Y	T	I	L	G	V	V	L	S	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	G	A	V	C	P	T	G	G	I	L	I	D	T	F	S	P	A
Template Known Secondary structure							T	T										S
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions