Job Description P36547 Confidence 94.40% Date Thu Jan 5 11:53:11 GMT 2012 Rank 100 Aligned Residues 112 % Identity 12% Template c2pbxB_ PDB info PDB header:transcription Chain: B: PDB Molecule:hemagglutinin/protease regulatory protein; PDBTitle: vibrio cholerae hapr Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	P	M	V	T	A	E	S	I	S	H	Q	S	Y	R	R	L	L	S	R	A	R	E	Y	V	L	E	N	M	S	E	P	V	T	V	L	D	L	C	N	Q	L	H	V	S	R	R	T	L	Q	N	A	F	H	A	I	L	G	I	G	P	N	A	W	L	K	R	I	R	L	N	A	V	R	R	E	L	I	S	P
Query Conservation
Alig confidence																																																													.	.
Template Conservation																																																													.	.
Template Sequence		E	K	R	P	R	T	R	L	S	P	Q	K	R	K	L	Q	L	M	E	I	A	L	E	V	F	A	K	R	G	I	G	R	G	G	H	A	D	I	A	E	I	A	Q	V	S	V	A	T	V	F	N	Y	F	P	T	R	E	D	L	.	.	V	D	D	V	L	N	F	V	V	R	Q	Y	S	N	F	L	T	D	H
Template Known Secondary structure																															T	T	S											T	S										S	S					.	.
Template Predicted Secondary structure																																																													.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.			.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		305	.	.	.	.	310	.	.	.								.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.
Query Sequence		W	S	Q	S	M	T	V	K	D	.	.	.	.	.	.	.	A	A	M	Q	W	G	F	W	H	L	G	Q	F	A	T	D	Y	Q	Q	L	F	S	E	K	P
Query Conservation											.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	D	L	D	L	D	V	K	T	N	L	Q	T	L	C	K	E	M	V	K	L	A	M	T	D	C	H	W	L	K	V	W	F	E	W	S	A	S	T	R	D
Template Known Secondary structure				T	T	S																		T	T	T												T				T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions