Job Description P36547 Confidence 95.72% Date Thu Jan 5 11:53:11 GMT 2012 Rank 21 Aligned Residues 101 % Identity 11% Template c2gfnA_ PDB info PDB header:transcription Chain: A: PDB Molecule:hth-type transcriptional regulator pksa related protein; PDBTitle: crystal structure of hth-type transcriptional regulator pksa related2 protein from rhodococcus sp. rha1 Resolution 1.90 Å

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		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.			.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure																																														.	.
Query SS confidence																																														.	.
Query Sequence		S	H	Q	S	Y	R	R	L	L	S	R	A	R	E	Y	V	L	E	N	M	S	E	P	V	T	V	L	D	L	C	N	Q	L	H	V	S	R	R	T	L	Q	N	A	F	.	.	H	A	I	L	G	I	G	P	N	A	W	L	K	R	I	R	L	N	A	V	R	R	E	L	I	S	P	W	S	Q	S	M	T	V
Query Conservation																																														.	.
Alig confidence																																														.	.
Template Conservation
Template Sequence		H	D	E	R	R	R	A	L	A	D	A	V	L	A	L	I	A	R	E	G	I	S	A	V	T	T	R	A	V	A	E	E	S	G	W	S	T	G	V	L	N	H	Y	F	G	S	R	H	E	L	L	L	A	A	L	R	R	A	G	D	I	Q	G	D	R	Y	R	T	I	L	D	E	E	G	A	G	P	I	E	K
Template Known Secondary structure																						G	G	G											S	S									T	S	S																									T		T	T
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	D	A	A	M	Q	W	G	F	W	H	L	G	Q	F	A	T	D	Y	Q	Q	L	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	R	N	I	T	A	S	I	L	P	L	D	E	R	R	L	A	X	T	R	V	F	L
Template Known Secondary structure								T	T	S			S
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions