Job Description P36547 Confidence 51.67% Date Thu Jan 5 11:53:11 GMT 2012 Rank 399 Aligned Residues 84 % Identity 13% Template c1wsuA_ PDB info PDB header:translation/rna Chain: A: PDB Molecule:selenocysteine-specific elongation factor; PDBTitle: c-terminal domain of elongation factor selb complexed with2 secis rna Resolution 2.30 Å

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		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.							.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.		.	.	.	.	.	.	310
Predicted Secondary structure																																																				.	.	.	.	.	.																	.
Query SS confidence																																																				.	.	.	.	.	.																	.
Query Sequence		Y	R	R	L	L	S	R	A	R	E	Y	V	L	E	N	M	S	E	P	V	T	V	L	D	L	C	N	Q	L	H	V	S	R	R	T	L	Q	N	A	F	H	A	I	L	G	I	G	P	N	A	.	.	.	.	.	.	W	L	K	R	I	R	L	N	A	V	R	R	E	L	I	S	.	P	W	S	Q	S	M	T
Query Conservation																																																				.	.	.	.	.	.																	.
Alig confidence																																																				.	.	.	.	.	.																	.
Template Conservation
Template Sequence		Q	K	K	L	L	K	D	L	E	D	K	Y	R	V	S	R	W	Q	P	P	S	F	K	E	V	A	G	S	F	N	L	D	P	S	E	L	E	E	L	L	H	Y	L	V	R	E	G	V	L	V	K	I	N	D	E	F	Y	W	H	R	Q	A	L	G	E	A	R	E	V	I	K	N	L	A	S	T	G	P	F	G
Template Known Secondary structure																	T	T	S			B									T																T	T	S					S	S	S	B																		G	G	G	S		B
Template Predicted Secondary structure
Template SS confidence
		515	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.
		311	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	D	A	A	M	Q	W	G	F	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	E	A	R	D	A	L	G	S	S
Template Known Secondary structure										T
Template Predicted Secondary structure
Template SS confidence
		595	.	.	.	.	600	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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