Return to main results Retrieve Phyre Job Id

Job DescriptionP36771
Confidence99.62%DateThu Jan 5 11:53:52 GMT 2012
Rank19Aligned Residues192
% Identity14%Templated1ixca2
SCOP infoPeriplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   99100.........110.........120.........130.........140.........150.... .....160.........170......
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Query Sequence  GVLTIGASDESADTILPFLLNRVSSVYPKLALDVRVKRNAYMAEMLESQEVDLMVT. . THRPSAFKALNLRTSPTHWYCA
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Template Sequence  GELSVAYFGTPIYRSLPLLLRAFLTSTPTATVSLTHXTKDEQVEGLLAGTIHVGFSRFFPRHPGIEIVNIAQEDLYLAVH
Template Known Secondary structure 
SGGGGT
TT

TS
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TT
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   91........100.........110.........120.........130.........140.........150.........160.........170
 
   177..180.........190.... .....200.........210.........220.........230.........240......
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Query Sequence  AEYILQKGEPIPLVLLDD. . . . . . . . . . PSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPD
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Template Conservation                 
     
                                           
 
    
       
Template Sequence  RSQSGKFGKTCKLADLRAVELTLFPRGGRPSFADEVIGLFKHAGIEPRIARVVEDATAALALTXAGAASSIVPASVAAIR
Template Known Secondary structure  GGGGGGT
S
GGGGTT



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   171........180.........190.........200.........210.........220.........230.........240.........250
 
   247..250.........260.........270.........280.........290
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Query Sequence  LRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNP
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Template Sequence  WPDIAFARIVGTRVKVPISCIFRKEKQPPILARFVEHVRRSAKD
Template Known Secondary structure 
TT

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   251........260.........270.........280.........290....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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