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Job DescriptionP36771
Confidence80.18%DateThu Jan 5 11:53:52 GMT 2012
Rank217Aligned Residues100
% Identity15%Templatec2xroE_
PDB info PDB header:dna-binding protein/dnaChain: E: PDB Molecule:hth-type transcriptional regulator ttgv; PDBTitle: crystal structure of ttgv in complex with its dna operator
Resolution3.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   14.....20...... ...30.........40.........50.........60.........70.........80.........90
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Query Sequence  DLLRTFVAVADLN. . . TFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEHGIQLLGYARKILRFNDEACS
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Template Sequence  RAASIMRALGSHPHGLSLAAIAQLVGLPRSTVQRIINAL. EEEFLVEALGPAGGFRLGPALGQLINQAQT. . DILSLVKP
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   1920.........30.........40.........50....... ..60.........70.........80....... ..90.....
 
   91........100.........110......
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Query Sequence  SLMFSNLQGVLTIGASDESADTILPF
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Template Sequence  YLRSLAEELDESVSLASLAGDKIYVL
Template Known Secondary structure  S
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   96...100.........110.........120.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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