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Job DescriptionP36771
Confidence98.98%DateThu Jan 5 11:53:52 GMT 2012
Rank37Aligned Residues181
% Identity7%Templatec2qsxB_
PDB info PDB header:transcriptionChain: B: PDB Molecule:putative transcriptional regulator, lysr family; PDBTitle: crystal structure of putative transcriptional regulator lysr from2 vibrio parahaemolyticus
Resolution1.64 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   101........110.........120.........130.........140.........150.........160.........170.........180
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Query Sequence  LTIGASDESADTILPFLLNRVSSVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYI
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Template Sequence  LVVDVTPSFASLWLVPNINDFHQRHPNIRVKILTGDGAV. . . . . GESDLHVRCLPLSTHYEYSQLLCEETLLLIGNTNLP
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   18.20.........30.........40.........50...... ...60.........70.........80.........90..
 
   181........190.........200.........210.........220.........230.........240.........250........
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Query Sequence  LQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVLSGVDGLPP. .
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Template Sequence  KNQAISHYPFIPQTTRP. . . QLWEQFKQENDITYHSVGFEHFYLACEAVRXEKGLALLPDFXAQFSILRGDIQHIGNLKL
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GGGGS
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   97..100.........110... ......120.........130.........140.........150.........160.........170...
 
   259260.........270.........280.........
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Query Sequence  . LPDTEYLLCYDPSSNNELAQVIYQAMESYHN
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Template Sequence  HSGYGYYVVIPNFRLTSRKVALFHDWLKDKLT
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GGGTT

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   181........190.........200.........210..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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