Job Description P36771 Confidence 99.51% Date Thu Jan 5 11:53:52 GMT 2012 Rank 28 Aligned Residues 189 % Identity 20% Template c2ql3G_ PDB info PDB header:transcription Chain: G: PDB Molecule:probable transcriptional regulator, lysr family protein; PDBTitle: crystal structure of the c-terminal domain of a probable lysr family2 transcriptional regulator from rhodococcus sp. rha1 Resolution 2.05 Å

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		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.			.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure																																																											.	.
Query SS confidence																																																											.	.
Query Sequence		Q	G	V	L	T	I	G	A	S	D	E	S	A	D	T	I	L	P	F	L	L	N	R	V	S	S	V	Y	P	K	L	A	L	D	V	R	V	K	R	N	A	Y	M	A	E	M	L	E	S	Q	E	V	D	L	M	V	T	.	.	T	H	R	P	S	A	F	K	A	L	N	L	R	T	S	P	T	H	W	Y	C
Query Conservation																																																											.	.
Alig confidence																																																											.	.
Template Conservation
Template Sequence		A	G	P	I	A	V	G	C	Y	P	A	L	G	P	T	I	L	P	S	X	L	Y	A	F	T	A	E	Y	P	R	A	S	V	E	F	R	E	D	T	Q	N	R	L	R	T	Q	L	E	G	G	E	L	D	V	A	I	V	Y	D	L	D	L	S	P	E	W	Q	T	V	P	L	X	T	R	E	P	X	V	V	L
Template Known Secondary structure											G	G	G	T	T	T	T													T	T																				T	S		S						S	S	S			S	S
Template Predicted Secondary structure
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		176	.	.	.	180	.	.	.	.	.									.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.
Query Sequence		A	A	E	Y	I	L	Q	K	G	E	.	.	.	.	.	.	.	.	P	I	P	L	V	L	L	D	D	P	S	P	F	R	D	M	V	L	A	T	L	N	K	A	D	I	P	W	R	L	A	Y	V	A	S	T	L	P	A	V	R	A	A	V	K	A	G	L	G	V	T	A	R	P	V	E	M	M	S	P	D	L
Query Conservation												.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	A	E	H	P	L	A	G	V	D	G	P	V	R	L	A	D	L	A	E	H	P	X	V	L	L	D	A	P	P	S	T	N	H	A	X	D	V	C	R	E	A	G	F	A	P	R	V	A	Y	R	T	A	N	F	E	T	A	R	A	F	V	G	R	G	L	G	W	T	L	L	L	Q	R	P	R	V	D	V	T
Template Known Secondary structure			T	T	S	T	T	T	T	S		S		B		G	G	G	G	T	T	S								T	T												T	T										S												T	S		B				S				S	S		B
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
		248	.	250	.	.	.	.	.	.	.						.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.
Query SS confidence												.	.	.	.	.
Query Sequence		R	V	L	S	G	V	D	G	L	P	.	.	.	.	.	P	L	P	D	T	E	Y	L	L	C	Y	D	P	S	S	N	N	E	L	A	Q	V	I	Y	Q	A	M	E	S
Query Conservation												.	.	.	.	.
Alig confidence												.	.	.	.	.
Template Conservation
Template Sequence		Y	E	G	L	P	V	V	V	K	P	I	A	E	P	K	P	A	S	V	A	V	V	V	A	W	H	Q	E	A	T	L	S	R	V	A	R	A	F	I	R	F	V	T	A
Template Known Secondary structure		T	T	S		B						B		S	S													T	T															T
Template Predicted Secondary structure
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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