 |
Job Description | P36771 | Confidence | 25.05% | Date | Thu Jan 5 11:53:52 GMT 2012 |
Rank | 368 | Aligned Residues | 42 |
% Identity | 17% | Template | c2o59B_ |
PDB info |
PDB header:isomerase/dna | Chain: B: PDB Molecule:dna topoisomerase 3; |
PDBTitle: structure of e. coli topoisomerase iii in complex with an 8-2 base single stranded oligonucleotide. frozen in glycerol3 ph 8.0
|
Resolution | 2.50 Å |
|
  |   |
38 | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | Q | S | A | V | S | Q | Q | M | Q | R | L | E | Q | L | V | G | K | E | L | F | A | R | H | G | R | N | K | L | L | T | E | H | G | I | Q | L | L | G | Y | A | R | K | I | L |
Query Conservation |   |
|
|
|
|
|
|   |   |
|   |   |
|
|   |   |
|
|   |   |
|
|   |
|   |   |   |   |   |   |
|
|   |   |
|   |   |
|   |   |   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|   |
|
|   |   |
|   |   |
| . | . | . |   |
|
|   |   |   |   |   |   |
|   |
|
|   |   |
|   |   |
|   |   |   |
|   |   |   |
|
Template Sequence |   |
T | E | A | T | R | A | G | I | I | E | L | L | F | K | R | . |
. |
. |
G | F | L | T | K | K | G | R | Y | I | H | S | T | D | A | G | K | A | L | F | H | S | L | P | E | M | A |
Template Known Secondary structure |   |
| T | T | T |  |  |  |  |  |  |  |  |  |  | T | . | . | . | T | S |  |  |  | S | S | S |  |  |  |  |
|  |  |  |  |  |  |  |  |  | S |
|  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
| . | . | . |
|
|  |  |  |  |
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
524 | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | |
|
|
. | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|