Job Description P17446 Confidence 99.87% Date Thu Jan 5 11:36:13 GMT 2012 Rank 8 Aligned Residues 186 % Identity 16% Template c3pasA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:tetr family transcription regulator; PDBTitle: crystal structure of a tetr family transcription regulator (maqu_1417)2 from marinobacter aquaeolei vt8 at 1.90 a resolution Resolution 1.90 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	S	I	R	R	R	Q	L	I	D	A	T	L	E	A	I	N	E	V	G	M	H	D	A	T	I	A	Q	I	A	R	R	A	G	V	S	T	G	I	I	S	H	Y	F	R	D	K	N	G	L	L	E	A	T	M	R	D	I	T	S	Q	L	R	D	A	V	L	N	R	L	H	A	L	P	Q	G	S	A	E	Q
Query Conservation
Alig confidence																																																																													.	.
Template Conservation																																																																													.	.
Template Sequence		D	D	S	K	R	I	A	F	L	E	A	T	V	R	E	V	A	D	H	G	F	S	A	T	S	V	G	K	I	A	K	A	A	G	L	S	P	A	T	L	Y	I	Y	Y	E	D	K	E	Q	L	L	L	A	T	F	Y	Y	V	S	D	Q	V	I	D	A	A	L	D	S	F	S	R	G	K	D	.	.	L	R	E
Template Known Secondary structure																																			T	S										S	S																										T		S	S	.	.
Template Predicted Secondary structure																																																																													.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.			80	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																																																												.
Query SS confidence																																																												.
Query Sequence		R	L	Q	A	I	V	G	G	N	F	D	E	T	Q	V	S	S	A	A	M	K	A	W	L	A	F	W	A	S	S	M	H	Q	P	M	L	Y	R	L	Q	Q	V	S	S	R	R	L	L	S	N	L	V	S	E	F	R	R	E	.	L	P	R	E	Q	A	Q	E	A	G	Y	G	L	A	A	L	I	D	G	L	W
Query Conservation																																																												.
Alig confidence																																																												.
Template Conservation
Template Sequence		G	L	R	R	Q	W	H	T	L	F	R	I	G	L	E	R	P	E	L	F	R	Y	H	E	T	F	T	H	S	A	W	X	T	P	E	I	Q	A	R	N	E	S	R	A	A	N	L	L	N	A	V	D	Q	G	K	Q	S	G	L	I	K	P	V	P	F	P	L	L	E	T	F	X	F	R	P	I	Y	H	L	V
Template Known Secondary structure																													T	S	T	T													T														T	S	B													T
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	A	A	L	S	G	K	P	L	D	K	T	R	A	N	S	L	T	R	H	F	I	T	Q	H	L	P	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	R	C	L	Q	G	S	F	E	G	T	D	E	H	I	E	L	A	F	N	X	A	W	D	A	V	A	D	R
Template Known Secondary structure						T	T	S	S																			B
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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