Job Description P17446 Confidence 99.84% Date Thu Jan 5 11:36:13 GMT 2012 Rank 30 Aligned Residues 178 % Identity 17% Template c3dcfB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:transcriptional regulator of the tetr/acrr PDBTitle: crystal structure of transcriptional regulator of the2 tetr/acrr family (yp_290855.1) from thermobifida fusca yx-3 er1 at 2.50 a resolution Resolution 2.50 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	R	R	R	Q	L	I	D	A	T	L	E	A	I	N	E	V	G	M	H	D	A	T	I	A	Q	I	A	R	R	A	G	V	S	T	G	I	I	S	H	Y	F	R	D	K	N	G	L	L	E	A	T	M	R	D	I	T	S	Q	L	R	D	A	V	L	N	R	L	H	A	L	P	Q	G	S	A	E	Q	R
Query Conservation
Alig confidence																																																																												.	.
Template Conservation																																																																												.	.
Template Sequence		N	D	R	R	T	Q	I	I	K	V	A	T	E	L	F	R	E	K	G	Y	Y	A	T	S	L	D	D	I	A	D	R	I	G	F	T	K	P	A	I	Y	Y	Y	F	K	S	K	E	D	V	L	F	A	I	V	N	S	I	V	D	E	A	L	E	R	F	H	A	I	A	A	G	P	G	S	.	.	P	G	E	R
Template Known Secondary structure																			T		T	T	T											T											S	S																									T	S	S	S		.	.
Template Predicted Secondary structure																																																																												.	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.			.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.						.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																																																								.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.
Query Sequence		L	Q	A	I	V	G	G	N	F	D	E	T	Q	V	S	S	A	A	M	K	A	W	L	A	F	W	A	S	S	M	H	Q	P	M	L	Y	R	L	Q	Q	V	S	S	R	R	L	L	S	N	L	V	S	E	F	.	.	.	.	.	R	R	E	L	P	R	E	Q	A	Q	E	A	G	Y	G	L	A	A	L	I	D
Query Conservation																																																								.	.	.	.	.
Alig confidence																									.	.	.	.	.	.																										.	.	.	.	.
Template Conservation																									.	.	.	.	.	.
Template Sequence		I	H	A	L	L	V	E	H	T	R	T	I	L	R	N	L	D	A	N	T	L	F	Y	.	.	.	.	.	.	N	L	S	P	E	R	E	R	E	X	R	K	R	E	R	E	Y	T	E	I	X	Q	R	L	Y	A	E	G	V	A	T	G	E	L	L	D	V	D	P	T	V	A	T	A	T	L	L	G	A	A	I
Template Known Secondary structure																S									.	.	.	.	.	.																															T	T	S	S			S
Template Predicted Secondary structure																									.	.	.	.	.	.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.							130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	W	L	R	A	A	L	S	G	K	P	L	D	K	T	R	A	N	S	L	T	R	H	F	I	T	Q	H	L	P	T
Query Conservation
Alig confidence						.
Template Conservation						.
Template Sequence		W	T	Y	R	.	W	Y	D	P	E	G	R	L	S	A	D	E	V	V	E	Q	I	T	R	L	L	L	N	G	Y	R	R
Template Known Secondary structure		T				.				T	T	S	S	S																	S
Template Predicted Secondary structure						.
Template SS confidence
		185	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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