Job Description P17446 Confidence 99.77% Date Thu Jan 5 11:36:13 GMT 2012 Rank 85 Aligned Residues 182 % Identity 13% Template c3cwrA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, tetr family; PDBTitle: crystal structure of transcriptional regulator of tetr2 family (yp_425770.1) from rhodospirillum rubrum atcc 111703 at 1.50 a resolution Resolution 1.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	G	M	Q	S	I	R	R	R	Q	L	I	D	A	T	L	E	A	I	N	E	V	G	M	H	D	A	T	I	A	Q	I	A	R	R	A	G	V	S	T	G	I	I	S	H	Y	F	R	D	K	N	G	L	L	E	A	T	M	R	D	I	T	S	Q	L	R	D	A	V	L	N	R	L	H	A	L	P	Q	G
Query Conservation
Alig confidence																																																																								.	.	.	.	.
Template Conservation																																																																								.	.	.	.	.
Template Sequence		P	A	V	P	D	A	V	V	R	E	S	I	V	G	A	A	Q	R	L	L	S	S	G	G	A	A	A	X	T	X	E	G	V	A	S	E	A	G	I	A	K	K	T	L	Y	R	F	A	S	G	R	A	D	L	I	G	L	L	V	E	S	W	I	A	P	I	F	P	G	F	.	.	.	.	.	E	A	D	P	Q
Template Known Secondary structure																										G	G	G											T											S	S														T	T	T	T	T	S		.	.	.	.	.		S	S		S
Template Predicted Secondary structure																																																																								.	.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.						80	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.							.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																																																																	.	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.	.
Query Sequence		S	A	E	Q	R	L	Q	A	I	V	G	G	N	F	D	E	T	Q	V	S	S	A	A	M	K	A	W	L	A	F	W	A	S	S	M	H	Q	P	M	L	Y	R	L	Q	Q	V	S	S	R	R	L	L	S	N	L	V	S	E	F	R	R	E	L	.	.	.	.	.	.	P	R	E	Q	A	Q	E	A	G	Y	G
Query Conservation																																																																	.	.	.	.	.	.
Alig confidence																																																																	.	.	.	.	.	.
Template Conservation
Template Sequence		D	A	A	A	A	L	E	R	I	V	Y	D	I	A	Q	A	V	L	S	R	E	A	V	S	L	F	R	X	L	A	S	D	A	D	L	R	N	R	F	L	P	A	Y	N	A	N	G	I	E	R	S	R	R	E	L	A	R	W	L	D	Q	Q	A	S	A	G	R	L	P	L	P	I	P	A	E	R	V	A	D	L
Template Known Secondary structure		S																	S	B																												T																		T	T	S	S			S	S
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170			.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.
Query SS confidence																.	.
Query Sequence		L	A	A	L	I	D	G	L	W	L	R	A	A	L	.	.	S	G	K	P	L	D	K	T	R	A	N	S	L	T	R	H	F	I	T
Query Conservation																.	.
Alig confidence																.	.
Template Conservation
Template Sequence		L	L	S	A	V	I	A	E	P	L	R	Q	I	T	L	G	L	R	E	P	L	P	A	W	D	I	A	P	R	V	A	D	A	V	R
Template Known Secondary structure							T										T	S	S			B	T	S	S
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions