Job Description P17446 Confidence 99.76% Date Thu Jan 5 11:36:13 GMT 2012 Rank 90 Aligned Residues 173 % Identity 18% Template c3crjC_ PDB info PDB header:transcription regulator Chain: C: PDB Molecule:transcription regulator; PDBTitle: crystal structure of a tetr transcription regulator from haloarcula2 marismortui atcc 43049 Resolution 2.60 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	R	R	Q	L	I	D	A	T	L	E	A	I	N	E	V	G	M	H	D	A	T	I	A	Q	I	A	R	R	A	G	V	S	T	G	I	I	S	H	Y	F	R	D	K	N	G	L	L	E	A	T	M	R	D	I	T	S	Q	L	R	D	A	V	L	N	R	L	H	A	L	P	Q	G	S	A	E	Q	R	L
Query Conservation
Alig confidence													.	.	.	.	.													.	.																																			.	.	.	.
Template Conservation													.	.	.	.	.													.	.																																			.	.	.	.
Template Sequence		D	Q	T	E	E	I	X	Q	A	T	Y	.	.	.	.	.	R	A	L	R	D	L	T	I	Q	R	I	A	.	.	D	E	Y	S	T	A	A	V	H	Y	Y	Y	D	T	K	D	D	L	L	A	A	F	L	D	Y	L	L	E	R	F	V	D	S	I	.	.	.	.	H	D	V	E	T	T	D	P	E	A	R	L
Template Known Secondary structure				G	G	G	T	T	T	S	T	T	.	.	.	.	.	G	G	G					S					.	.	T	T			T	T	T	S		T	T	S	S																						.	.	.	.	T	T					S
Template Predicted Secondary structure													.	.	.	.	.													.	.																																			.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.						.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.					.	.	70	.	.	.	.	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.						.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.
Query Sequence		Q	A	I	V	G	G	N	F	D	E	T	Q	V	S	S	A	A	M	K	A	W	L	A	F	W	A	S	S	M	H	Q	P	M	L	Y	R	L	Q	Q	V	S	S	R	R	L	L	S	N	L	V	S	E	F	.	.	.	.	.	R	R	E	L	P	R	E	Q	A	Q	E	A	G	Y	G	L	A	A	L	I	D	G
Query Conservation																																																							.	.	.	.	.
Alig confidence																																																							.	.	.	.	.
Template Conservation
Template Sequence		N	L	L	L	D	E	L	L	V	K	P	Q	E	N	P	D	L	S	V	A	L	L	E	X	R	S	Q	A	P	Y	K	E	A	F	S	D	R	F	R	Q	N	D	E	Y	V	R	Y	X	L	K	A	V	I	N	H	G	I	D	E	G	V	F	T	D	V	D	A	E	H	V	T	R	S	L	L	T	I	I	D	G
Template Known Secondary structure										T	G	G	G	S															G	G	G																														T	S	S
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	W	L	R	A	A	L	S	G	K	P	L	D	K	T	R	A	N	S	L	T	R	H	F	I	T	Q	H	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	R	T	R	A	V	X	L	D	D	T	E	E	L	E	T	A	R	Q	T	A	S	E	Y	A	D	A	X	L
Template Known Secondary structure									T	T		T
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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