Job Description P17446 Confidence 99.68% Date Thu Jan 5 11:36:13 GMT 2012 Rank 111 Aligned Residues 175 % Identity 18% Template c3bqyA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:putative tetr family transcriptional regulator; PDBTitle: crystal structure of a possible tetr family transcriptional regulator2 from streptomyces coelicolor a3(2). Resolution 1.95 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	Q	L	I	D	A	T	L	E	A	I	N	E	V	G	M	H	D	A	T	I	A	Q	I	A	R	R	A	G	V	S	T	G	I	I	S	H	Y	F	R	D	K	N	G	L	L	E	A	T	M	R	D	I	T	S	Q	L	R	D	A	V	L	N	R	L	H	A	L	P	Q	G	S	A	E	Q	R	L	Q	A
Query Conservation
Alig confidence																																																																.	.	.	.
Template Conservation																																																																.	.	.	.
Template Sequence		R	A	R	T	V	Q	T	A	L	D	L	L	N	E	S	G	L	D	T	L	T	X	R	R	L	A	Q	A	X	D	V	Q	A	G	A	L	Y	R	Y	F	A	A	K	Q	D	L	L	T	A	X	A	E	H	X	V	D	G	V	A	D	A	A	.	.	.	.	G	A	T	G	D	G	D	W	S	E	R	T	A	R
Template Known Secondary structure																		G	G	G											T	S										S	S													T	T	T	G	G	G	G	G	.	.	.	.		S	T	T	S	S
Template Predicted Secondary structure																																																																.	.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.					.	80	.	.	.	.	.	.	.	.	.	90	.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.																										.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	V	G	G	N	F	D	E	T	Q	V	S	S	A	A	M	K	A	W	L	A	F	W	A	S	S	M	H	Q	P	M	L	Y	R	L	Q	Q	V	S	S	R	R	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	S	N	L	V	S	E	F	R	R	E	L
Query Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.
Template Sequence		L	A	R	A	L	R	A	A	L	L	A	H	R	D	G	A	R	V	F	A	.	.	.	G	T	H	A	T	G	P	N	T	L	R	F	A	D	G	L	V	G	V	L	R	E	A	G	F	G	D	G	D	A	A	R	A	L	Y	S	V	A	N	F	T	V	G	H	T	L	E	E	Q	A	A	L	T	P	G	G	G
Template Known Secondary structure												T	S	T	T							.	.	.	T		S	S																			T	T																													S	T	T
Template Predicted Secondary structure																						.	.	.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.				.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	R	E	Q	A	Q	E	A	G	Y	G	L	A	A	L	I	D	G	L	W	L	R	A	A	L	S	G	K	P	L	D	K	T	R	A	N	S	L	T	R	H	F	I	T	Q	H	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	P	L	D	E	A	T	L	R	E	A	V	A	A	G	T	Y	P	H	L	A	A	T	L	P	V	L	T	S	T	D	F	T	A	H	F	E	F	G	L	R	L	L	L	D	G	L
Template Known Secondary structure		S	T	T											T	T	T												T
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions