Job Description P17446 Confidence 99.79% Date Thu Jan 5 11:36:13 GMT 2012 Rank 78 Aligned Residues 186 % Identity 17% Template c2zcxA_ PDB info PDB header:transcription Chain: A: PDB Molecule:tetr-family transcriptional regulator; PDBTitle: crystal structure of tetr family transcriptional regulator2 sco7815 Resolution 2.22 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	Q	S	I	R	R	R	Q	L	I	D	A	T	L	E	A	I	N	E	V	G	M	H	D	A	T	I	A	Q	I	A	R	R	A	G	V	S	T	G	I	I	S	H	Y	F	R	D	K	N	G	L	L	E	A	T	M	R	D	I	T	S	Q	L	R	D	A	V	L	N	R	L	H	A	L	P	Q	G	S	A	E
Query Conservation
Alig confidence																																																																														.	.
Template Conservation																																																																														.	.
Template Sequence		A	K	Q	Q	R	E	E	A	I	L	D	A	A	R	E	L	G	T	E	R	G	I	R	E	I	T	L	T	D	I	A	A	T	V	G	M	H	K	S	A	L	L	R	Y	F	E	T	R	E	Q	I	F	L	K	I	T	A	E	G	W	K	E	W	S	A	E	L	C	A	R	L	R	E	L	P	G	.	.	A	A
Template Known Secondary structure		T	T																				S	T	T											T	S										S	S																									T	T	S		T	.	.	T
Template Predicted Secondary structure																																																																														.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.			.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.			.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure																																																													.	.
Query SS confidence																																																													.	.
Query Sequence		Q	R	L	Q	A	I	V	G	G	N	F	D	E	T	Q	V	S	S	A	A	M	K	A	W	L	A	F	W	A	S	S	M	H	Q	P	M	L	Y	R	L	Q	Q	V	S	S	R	R	L	L	S	N	L	V	S	E	F	R	R	E	.	.	L	P	R	E	Q	A	Q	E	A	G	Y	G	L	A	A	L	I	D	G
Query Conservation																																																													.	.
Alig confidence																																																													.	.
Template Conservation
Template Sequence		P	D	A	V	G	Q	V	F	A	A	T	L	A	A	R	P	L	F	C	D	L	L	A	Q	A	P	L	N	L	E	R	N	V	S	V	E	S	V	R	S	F	K	I	A	T	L	D	E	V	G	R	I	G	A	E	L	R	R	L	L	G	V	D	E	T	Q	A	V	D	V	I	A	T	A	T	S	L	A	G	A
Template Known Secondary structure															T															T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		164	.	.	.	.															.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	W	L	R	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	S	G	K	P	L	D	K	T	R	A	N	S	L	T	R	H	F	I	T	Q	H	L	P
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	W	Q	M	A	T	P	G	P	H	I	Q	T	L	Y	R	S	D	P	R	L	A	H	A	V	V	E	V	E	P	R	L	N	R	V	L	G	A	L	L	R	G	I	A
Template Known Secondary structure								S												G	G	G	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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