Job Description P17446 Confidence 99.58% Date Thu Jan 5 11:36:13 GMT 2012 Rank 122 Aligned Residues 158 % Identity 16% Template c2w53B_ PDB info PDB header:transcription Chain: B: PDB Molecule:repressor; PDBTitle: structure of smet, the repressor of the stenotrophomonas2 maltophilia multidrug efflux pump smedef. Resolution 2.00 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	Q	L	I	D	A	T	L	E	A	I	N	E	V	G	M	H	D	A	T	I	A	Q	I	A	R	R	A	G	V	S	T	G	I	I	S	H	Y	F	R	D	K	N	G	L	L	E	A	T	M	R	D	I	T	S	Q	L	R	D	A	V	L	N	R	L	H	A	L	P	Q	G	S	A	E	Q	R	L	Q	A
Query Conservation
Alig confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	E	G	I	L	D	A	A	E	M	I	G	A	R	A	G	Y	T	S	E	V	L	A	A	I	V	E	R	V	H	L	P	F	M	Q	E	L	E	R	T	S	T	D	Q	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	T	P	V	H	D	L	R	A
Template Known Secondary structure																	T																								T	T		T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.																											.	.	60	.	.	.	.	.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.			.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.
Query SS confidence																																																								.	.
Query Sequence		I	V	G	G	N	F	D	E	T	Q	V	S	S	A	A	M	K	A	W	L	A	F	W	A	S	S	M	H	Q	P	M	L	Y	R	L	Q	Q	V	S	S	R	R	L	L	S	N	L	V	S	E	F	R	R	E	.	.	L	P	R	E	Q	A	Q	E	A	G	Y	G	L	A	A	L	I	D	G	L	W	L	R	A
Query Conservation																																																								.	.
Alig confidence																																																								.	.
Template Conservation
Template Sequence		V	M	I	H	S	F	I	E	L	S	E	D	E	R	L	R	K	T	M	E	I	M	L	R	S	R	V	L	T	E	M	Q	Q	A	G	F	R	D	A	L	D	R	M	E	R	A	L	R	R	A	R	D	L	G	Q	L	R	E	G	A	D	P	K	I	A	A	R	M	L	H	A	T	V	L	G	V	L	H	G	A
Template Known Secondary structure																								T																														T	T		B		T	T
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		169	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		A	L	S	G	K	P	L	D	.	K	T	R	A	N	S	L	T	R	H	F	I	T	Q	H	L	P	T
Query Conservation										.
Alig confidence										.
Template Conservation
Template Sequence		M	V	E	P	E	L	M	D	L	K	R	D	G	M	L	A	L	D	M	T	L	A	A	Y	V	K	D
Template Known Secondary structure					T	T	T																			B		T
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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