Job Description P17446 Confidence 99.86% Date Thu Jan 5 11:36:13 GMT 2012 Rank 14 Aligned Residues 183 % Identity 15% Template c2genA_ PDB info PDB header:transcription Chain: A: PDB Molecule:probable transcriptional regulator; PDBTitle: structural genomics, the crystal structure of a probable2 transcriptional regulator from pseudomonas aeruginosa pao1 Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	R	Q	L	I	D	A	T	L	E	A	I	N	E	V	G	M	H	D	A	T	I	A	Q	I	A	R	R	A	G	V	S	T	G	I	I	S	H	Y	F	R	D	K	N	G	L	L	E	A	T	M	R	D	I	T	S	Q	L	R	D	A	V	L	N	R	L	H	A	L	P	Q	G	S	A	E	Q	R	L	Q
Query Conservation
Alig confidence																																																																										.	.
Template Conservation																																																																										.	.
Template Sequence		R	K	D	E	I	L	Q	A	A	L	A	C	F	S	E	H	G	V	D	A	T	T	I	E	X	I	R	D	R	S	G	A	S	I	G	S	L	Y	H	H	F	G	N	K	E	R	I	H	G	E	L	Y	L	A	G	I	G	Q	Y	A	A	L	L	E	A	G	F	A	R	A	R	S	.	.	A	E	E	T	V	R
Template Known Secondary structure																			T	T	T																					T		S																													S	.	.
Template Predicted Secondary structure																																																																										.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.			.	.	80	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.				.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																									.	.	.																																	.
Query SS confidence																									.	.	.																																	.
Query Sequence		A	I	V	G	G	N	F	D	E	T	Q	V	S	S	A	A	M	K	A	W	L	A	F	.	.	.	W	A	S	S	M	H	Q	P	M	L	Y	R	L	Q	Q	V	S	S	R	R	L	L	S	N	L	V	S	E	F	R	R	E	.	L	P	R	E	Q	A	Q	E	A	G	Y	G	L	A	A	L	I	D	G	L	W
Query Conservation																									.	.	.																																	.
Alig confidence																									.	.	.																																	.
Template Conservation
Template Sequence		L	L	V	T	S	Y	I	D	W	V	V	A	N	P	D	W	A	R	F	I	L	H	S	R	G	R	V	E	A	G	E	L	G	E	R	L	R	A	D	N	Q	A	H	F	A	R	I	H	A	A	L	A	G	Y	R	A	E	G	L	F	R	E	X	P	D	D	C	F	A	S	V	V	I	G	P	A	H	D	L	A
Template Known Secondary structure																															S	T	T																									T	T		B
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	A	A	L	S	G	K	P	L	D	K	T	R	A	N	S	L	T	R	H	F	I	T	Q	H	L	P	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	Q	W	L	A	G	R	T	R	V	A	L	A	D	C	R	E	L	L	A	Q	V	A	W	D	S	V	R	A
Template Known Secondary structure						T	T			S	S		G	G	G	G													B
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions