Job Description P17446 Confidence 99.75% Date Thu Jan 5 11:36:13 GMT 2012 Rank 91 Aligned Residues 178 % Identity 13% Template c2d6yA_ PDB info PDB header:gene regulation Chain: A: PDB Molecule:putative tetr family regulatory protein; PDBTitle: crystal structure of transcriptional factor sco4008 from streptomyces2 coelicolor a3(2) Resolution 2.30 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	R	R	R	Q	L	I	D	A	T	L	E	A	I	N	E	V	G	M	H	D	A	T	I	A	Q	I	A	R	R	A	G	V	S	T	G	I	I	S	H	Y	F	R	D	K	N	G	L	L	E	A	T	M	R	D	I	T	S	Q	L	R	D	A	V	L	N	R	L	H	A	L	P	Q	G	S	A	E	Q	R
Query Conservation
Alig confidence																																																																				.	.	.	.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.	.	.	.
Template Sequence		E	A	T	K	A	R	I	F	E	A	A	V	A	E	F	A	R	H	G	I	A	G	A	R	I	D	R	I	A	A	E	A	R	A	N	K	Q	L	I	Y	A	Y	Y	G	N	K	G	E	L	F	A	S	V	L	E	K	K	X	L	D	L	A	I	S	V	P	.	.	.	.	.	.	.	.	.	V	D	P	D	D
Template Known Secondary structure																				T	T	T	S											T											S	S																				S		.	.	.	.	.	.	.	.	.			G	G	G
Template Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.										.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.			.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																									.																																				.	.
Query SS confidence																									.																																				.	.
Query Sequence		L	Q	A	I	V	G	G	N	F	D	E	T	Q	V	S	S	A	A	M	K	A	W	L	.	A	F	W	A	S	S	M	H	Q	P	M	L	Y	R	L	Q	Q	V	S	S	R	R	L	L	S	N	L	V	S	E	F	R	R	E	L	.	.	P	R	E	Q	A	Q	E	A	G	Y	G	L	A	A	L	I	D	G	L
Query Conservation																									.																																				.	.
Alig confidence																									.																																				.	.
Template Conservation
Template Sequence		I	E	G	W	I	D	R	L	L	D	Y	H	A	A	H	P	E	L	L	R	L	L	F	W	E	G	X	E	Y	G	T	A	E	L	P	H	E	A	E	R	Q	E	H	Y	A	R	K	V	A	A	V	R	D	G	Q	E	R	G	V	I	T	D	A	I	P	A	P	D	L	L	F	L	L	V	A	X	A	N	W	A
Template Known Secondary structure																	T														T	T	S			T	T																					T	T	S	S			S	S
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		165	.	.						.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure					.	.	.	.	.
Query SS confidence					.	.	.	.	.
Query Sequence		W	L	R	.	.	.	.	.	A	A	L	S	G	K	P	L	D	K	T	R	A	N	S	L	T	R	H	F	I	T	Q	H	L	P	T
Query Conservation					.	.	.	.	.
Alig confidence					.	.	.	.	.
Template Conservation
Template Sequence		V	V	V	P	Q	X	K	R	I	L	V	G	G	G	D	A	G	T	D	G	L	R	D	S	I	K	K	A	A	R	R	I	V	D	R
Template Known Secondary structure														S
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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