Job Description P17446 Confidence 99.66% Date Thu Jan 5 11:36:13 GMT 2012 Rank 115 Aligned Residues 176 % Identity 16% Template c1z0xA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator, tetr family; PDBTitle: crystal structure of transcriptional regulator, tetr family from2 enterococcus faecalis v583 Resolution 2.40 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		R	R	R	Q	L	I	D	A	T	L	E	A	I	N	E	.	V	G	M	H	D	A	T	I	A	Q	I	A	R	R	A	G	V	S	T	G	I	I	S	H	Y	F	R	D	K	N	G	L	L	E	A	T	M	R	D	I	T	S	Q	L	R	D	A	V	L	N	R	L	H	A	L	P	Q	G	S	A	E	Q	R	L
Query Conservation																	.
Alig confidence																	.																																													.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.
Template Sequence		S	K	D	T	I	I	A	A	A	F	S	L	L	E	K	S	P	T	L	E	Q	L	S	X	R	K	V	A	K	Q	L	G	V	Q	A	P	A	I	Y	W	Y	F	K	N	K	Q	A	L	L	Q	S	X	A	E	A	I	E	E	H	F	.	.	.	.	.	.	.	Q	E	P	A	L	C	G	E	W	Y	S	D	L
Template Known Secondary structure		S															S			G	G	G											T	S							T	T		S	S															T		.	.	.	.	.	.	.							S
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.								.	.	.	.	70	.	.	.	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.																		.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.									.	140	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.
Query Sequence		Q	A	I	V	G	G	N	F	D	E	T	Q	V	S	S	A	A	M	K	A	W	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	W	A	S	S	M	H	Q	P	M	L	Y	R	L	Q	Q	V	S	S	R	R	L	L	S	N	L	V	.	.	.	.	.	.	.	.	S	E	F	R	R
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	A	F	X	E	N	Y	Y	D	L	Y	Q	Q	F	P	C	A	V	A	I	E	I	Q	T	V	P	A	Y	P	Q	R	L	R	H	L	N	Q	X	X	G	I	L	R	E	A	G	F	S	P	E	X	T	H	L	A	V	T	S	L	Q	H	L	L	F	G	X	I	X	D	A	T	E	E	K	Q	L	V	S	Q	V
Template Known Secondary structure															S	T	T							T	S				S																	T	T
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	P	R	E	Q	A	Q	E	A	G	Y	G	L	A	A	L	I	D	G	L	W	L	R	A	A	L	S	G	K	P	L	D	K	T	R	A	N	S	L	T	R	H	F	I	T	Q	H	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	N	G	D	D	Y	L	K	E	Q	V	L	H	X	K	Q	Y	V	S	D	N	E	L	T	Y	X	E	E	S	I	Q	F	H	S	I	H	Q	K	S	A	F	I	Q	A	V	K	T	Y	L
Template Known Secondary structure			T	T																		T	T									T			G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions